Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1715 ATGTCGATTTCCTACTCCAACTTCTTCTCCGAATCCGACCTCTTATGCGGCGAGGAAACCACCAGCATCTTGTCCTCAGATTCACCGACGGAATCCTTCTCCGATGTTGAATCTTATCCGCCGCCGGAGGATGAGTTCATCGCCGGATTAATCGAAGACGAACGTAAATTCGTCATCGGATTCGATTATTTCGCAAAGATGAAATCTCGCTCGTTCGATTCCGATGCTAGAGATGAATCTATTGGATGGATCCTAAAGGTGCAGGGTTATTACGGTTTTCAACCGCTTACGGCGTATCTTGCCGTGAACTATATGGATCGGTTCTTGAATTCTCGGCGGTTGCCGCAAACAAATGGGTGGCCACTGCAACTTCTATCAGTTGCTTGCTTGTCTTTAGCAGCAAAGATGGAGGAGACTCTAGTCCCTTCTCTATTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAGGCCAGAACAATTAGAAGAATGGAACTTCTTGTTCTAAGTGTCTTGGATTGGAGGTTAAGATCAGTTACCCCATTTAACTACCTCAGTTTCTTTGCGTGCAAGTTAGATTCAACTTCAACTTTTACTGGGTTCCTCATTTCACGAGCTACACAAATTATCTTATCTAATATCCAAGAGGCCAGCATTTTTGCGTATTGGCCCTCATGCATTGCTGCCGCGGCTATACTCTATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTAAAGCCCGAGCATGCCGAGTCGTGGTGCGAGGGGCTAAGAAAAGAGAAAATTCTAGGGTGCTACAGGTTAATGCAAGAACTTGTGATTGATAATAACGTGAGGAAACCCCCTAAAGTGTTGCCACAGATGCGAGTGACAATTCAGCCCCTTATGAGGTCATGTGTCTCATCATCCTCCTCTTCTCCTTCCTCATCATCATCATTATCCTATAAAAGAAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGATCAAGCTCCCAATAA 1008 0.4435 MSISYSNFFSESDLLCGEETTSILSSDSPTESFSDVESYPPPEDEFIAGLIEDERKFVIGFDYFAKMKSRSFDSDARDESIGWILKVQGYYGFQPLTAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGAKYIFEARTIRRMELLVLSVLDWRLRSVTPFNYLSFFACKLDSTSTFTGFLISRATQIILSNIQEASIFAYWPSCIAAAAILYAANEIPNWSLVKPEHAESWCEGLRKEKILGCYRLMQELVIDNNVRKPPKVLPQMRVTIQPLMRSCVSSSSSSPSSSSSLSYKRRKLNNCLWVDDDKGSSSQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1715 335 Gene3D - 60 177 - -
Mal6g1715 335 Gene3D - 50 240 - -
Mal6g1715 335 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Mal6g1715 335 SMART Cyclin_C_2 179 308 IPR004367 -
Mal6g1715 335 CDD CYCLIN 83 169 IPR013763 -
Mal6g1715 335 SMART cyclin_7 82 170 IPR013763 -
Mal6g1715 335 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 323 - -
Mal6g1715 335 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Mal6g1715 335 Pfam Cyclin, C-terminal domain 179 285 IPR004367 -
Mal6g1715 335 PANTHER CYCLINS 1 323 IPR039361 -
Mal6g1715 335 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Mal6g1715 335 SUPERFAMILY Cyclin-like 161 274 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1715 Mal-Chr6 32637312 32641011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1715 1 334 Core Cell Cycle Gene Families AT1G70210 58.754 7.98e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1715 K18810 - gmx:100780369 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1715 6 32637312 32641011 Mal6g1715 6 32637312 32641011 ECH
Mal6g1715 6 32637312 32641011 Mal5g2691 5 78692914 78695275 PCT