Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1672 ATGCATTTTTTTCACTCTCAAATCCACAATAGCAATGATGCTATCACAAACCCTTCAATTATTTCTCCATATTCTTCAATTCCATATAATTATCACAACCAGAAAAATTCAGAACCAACCCAAATTTCTTCATCTTCTGGTAACAAAATAAGCCCTGCAATTCTTTTCATCATAGTTATATTAGCTATTATATTTTTCATCTTAGGTTTCCTTCACTTACTTGTAAGATTTCTCATAAAGCATAGATCTTCATCATCATCAACAACAATTTCTCAATCAAATAGATTTCCAGAATTGTCTGAATCTGATGCATACCAAAGACAATTACAACAGCTTTTCACTCTTCATGATTCAGGTTTGGATCAAGCATTCATTGATGCACTTCCTGTTTTCATATACAAAGAGATAATTGGTTTGAAGCAAGATAAGCCATTTGATTGTGCTGTTTGTTTATGTGAGTTTTTGGAACAAGATAAGCTAAGATTGTTACCAAATTGTAACCATGCTTTCCATATTGGTTGTATAGATACATGGTTGTTGTCAAATTCATCTTGTCCTTTATGTAGAGGTACCCTTTATGCACAAGGGTTTTCTTTTGATAAAAATCATGTTTTTGAGTTTGAGGATCAAAGGGATGAAGAATTTGTTATAGGGATTGGTTCAGTTAACAAGGATATGGAAAATAGTATAATGAATGGGAAAAGGGTATTTTCTGTTAGGCTTGGAAAGTTTAGAAGTTCAAATAATGAAGAAGGGGTTGAAAAAAGTGAAGGAGAGAGTAGTAATTGTAATTTAGATGCTAGGAGATGTTATTCAATGGGGTCTTTTCAGTATGTTGTTGCTGATTCAGATTTGCAAGTTGCTTTGAAAGCTTCTAAAGGTGATGGTAGTATGAGACAATTGAAGGGAATTAGAGAAATTCAAGATGGGAATTTTTGCAATGATGGTGATGTTGAAGGCAAGAAAATCAACATTGCAAGGAAAGGTGAAAGCTTTTCTGTTTCAAAGATTTGGCAATGGTCTAAGAAAGATAATAAGATGCAAAGTTCATCTGATACACATTTTCATAATTGTGTTGCCAATGAAAGTTTGCCATGGATGAATAAAGCTAGAGGTACATGA 1122 0.3298 MHFFHSQIHNSNDAITNPSIISPYSSIPYNYHNQKNSEPTQISSSSGNKISPAILFIIVILAIIFFILGFLHLLVRFLIKHRSSSSSTTISQSNRFPELSESDAYQRQLQQLFTLHDSGLDQAFIDALPVFIYKEIIGLKQDKPFDCAVCLCEFLEQDKLRLLPNCNHAFHIGCIDTWLLSNSSCPLCRGTLYAQGFSFDKNHVFEFEDQRDEEFVIGIGSVNKDMENSIMNGKRVFSVRLGKFRSSNNEEGVEKSEGESSNCNLDARRCYSMGSFQYVVADSDLQVALKASKGDGSMRQLKGIREIQDGNFCNDGDVEGKKINIARKGESFSVSKIWQWSKKDNKMQSSSDTHFHNCVANESLPWMNKARGT* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1672 373 SUPERFAMILY RING/U-box 124 195 - -
Mal6g1672 373 ProSiteProfiles Zinc finger RING-type profile. 147 189 IPR001841 -
Mal6g1672 373 CDD RING-H2_PA-TM-RING 146 189 - -
Mal6g1672 373 SMART ring_2 147 188 IPR001841 -
Mal6g1672 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 194 IPR013083 -
Mal6g1672 373 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 367 - -
Mal6g1672 373 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 367 - -
Mal6g1672 373 Pfam Ring finger domain 146 189 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1672 Mal-Chr6 31349021 31350142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1672 48 351 C3H Transcription Factor Family AT2G18650 43.027 5.20e-58 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1672 6 31349021 31350142 Mal5g2892 5 86179917 86180912 PCT