Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1637 ATGGATCAAATATCAGCACATGGACATTCACTTCCTCCACCTTTCCACACAGCAAGAGATCTTCATCTTCACCATCAACACCAACAACAGCAACAACAACAGCAACACCATCAATTCCACTCTTTACAGCAGCAGCAACAAACCACAGATCAAGATGAACAAAGCGGAAGCAGCAGCGGCGGCGGCCTCAACCTCACAAACCGTGAAGAAAACAGCAACAACAAATTCAGCACCGATTTCAGCCCGAAACTAGAATCCGGAGGTGGAGGTTCCGGCGGCGATAACGATTCAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAAAACAAACCAAAACCACCAATCATCATCACACGTGACAGCGCAAACGCCTTGAAAACTCACGTGATGGAAGTTGCAGACGGTTGTGACGTCGTTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAGAGAGGCGTTTGTATTATGAGTGGTACTGGAACGGTTACAAACGTGACGTTAAGGCAACCGGCTTCTCCTGGAGCTGTTGTTACACTTCACGGAAGGTTCGAGATTCTTTCGCTAGCTGGATCGTTTCTTCCACCGCCTGCTCCGCCCGCTGCTTCTGGTTTGACCATATATTTAGCGGGCGGACAAGGGCAGGTTGTTGGTGGAAGTGTTGTTGGTGCTTTGATTGCTTCTGGACCAGTTGTTATTATGTCTGCTTCTTTTAGTAACGCTGCTTATGAGAGACTTCCTTTGGAAGAAGATGATGGTTCTTCAATTCAACAGCTTCAAGGTGGTGGTGGTGGTGGTGGTGGTTCTCCGAGTGGTGGTTGTGTTCAGCAACAACAACAACTTTTAGGAGATTCAACTGCTCCACTTTTTCAAGCTATGCCTCCTCCAAATTCTAATCCTAATCTTAATCCTAATCTTCTCGGTCAGATGCCTTCTGATAATTTCTGGCCAACCGGTCGTTCTCCTTATTGA 975 0.4718 MDQISAHGHSLPPPFHTARDLHLHHQHQQQQQQQQHHQFHSLQQQQQTTDQDEQSGSSSGGGLNLTNREENSNNKFSTDFSPKLESGGGGSGGDNDSMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEEDDGSSIQQLQGGGGGGGGSPSGGCVQQQQQLLGDSTAPLFQAMPPPNSNPNLNPNLLGQMPSDNFWPTGRSPY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1637 324 ProSiteProfiles PPC domain profile profile. 124 261 IPR005175 -
Mal6g1637 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Mal6g1637 324 Gene3D - 127 261 - -
Mal6g1637 324 MobiDBLite consensus disorder prediction 303 324 - -
Mal6g1637 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 324 IPR014476 GO:0003680
Mal6g1637 324 MobiDBLite consensus disorder prediction 1 118 - -
Mal6g1637 324 MobiDBLite consensus disorder prediction 253 324 - -
Mal6g1637 324 MobiDBLite consensus disorder prediction 272 287 - -
Mal6g1637 324 MobiDBLite consensus disorder prediction 27 81 - -
Mal6g1637 324 CDD DUF296 128 195 IPR005175 -
Mal6g1637 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 253 - -
Mal6g1637 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 6 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1637 Mal-Chr6 30316955 30317929 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1637 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 53.714 8.04e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1637 - - gmx:100781436 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1637 6 30316955 30317929 Mal6g1637 6 30316955 30317929 ECH