Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1631 ATGCAAAGTTCATCACCGCCGCAGAAGGCGGCCATAGCTATGCCGATAAAGAAGAAAAGGGGTCGCCCCAGAAAGTACGGACCACACGGGCCCTTAAACTTGGTGATGTCTTCAAAGCCAACATCTAGCTCCATCGGCAAAGCTGCCAACTTTGAGTGGGAGAAACCAGGCCAATTGCTTACAAGCTCAGTAGGCACTATATTAAATTTAGATCCTCATGAGGACACTACTGTTCTTCCTCTAAATCAAGTTAAGAAATTCATTAATGAAGATCAAACTCAAAACCATCAAGAACTAGAGCATGAGGTGTCAGAAACTGCTTCTTTTACACCCCGTATTATCACCGTTAATGCTGGAGAGGATGTTACTATGAAGGTAATGTCATTTTGTCAGCAAGAACCAGAAGCTATGTGCATTCTATCTGCAAATGGAGTCATATCAAGCGCCACCATTTGTGAGGCTCAATCGTCTGAAAAACTATTCAGATATGAGGTGAAGCATTTATGTAATCTGAAAGTAGTACTAATAGTATCATTTTTCCTAATTCAATGTACTAATACGGAGTTTAGGTGTATGTAG 579 0.4111 MQSSSPPQKAAIAMPIKKKRGRPRKYGPHGPLNLVMSSKPTSSSIGKAANFEWEKPGQLLTSSVGTILNLDPHEDTTVLPLNQVKKFINEDQTQNHQELEHEVSETASFTPRIITVNAGEDVTMKVMSFCQQEPEAMCILSANGVISSATICEAQSSEKLFRYEVKHLCNLKVVLIVSFFLIQCTNTEFRCM* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1631 192 Pfam Plants and Prokaryotes Conserved (PCC) domain 112 158 IPR005175 -
Mal6g1631 192 ProSiteProfiles PPC domain profile profile. 105 192 IPR005175 -
Mal6g1631 192 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 3 164 - -
Mal6g1631 192 Gene3D - 112 180 - -
Mal6g1631 192 CDD DUF296 110 166 IPR005175 -
Mal6g1631 192 MobiDBLite consensus disorder prediction 1 39 - -
Mal6g1631 192 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 164 IPR039605 GO:0003680
Mal6g1631 192 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1631 Mal-Chr6 30209063 30210090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1631 16 166 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 42.384 1.52e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1631 - - mtr:MTR_5g011620 159.844