Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1630 ATGCCAAATGAAAGTCACGATGGTGGCATAAGTGTTTCTTTATCGGGTCTAGACAGACGTTTTATTGGCGGTCTCGTAGCTGGTCCATTGGTGGCTGCAAGTCCTGTAACTGTAGTGGTAGGCTGTTTTCTGGCAAATGAACAACATGAGCATAAGCTAAAAAAGCAGAAAAATGAGGTAACTTCAATCGTAACGCCAATGGAAGCTGTTCCTGTGTCTACTGCTGGCCAATTGTTTGCAAGCTCAATTCGTGCTACTTTCACACCTCATATTATCATTGTTAATGCTGGAGAGGATGTTATTATGAAGGTAATGACATTTTGTCCACAAACACCAGTAGCTATACGAATTATATCTGCAAATGGAGTCACATCAAGAGCCACCATTGATCGGCCTCAAGCATCTGGAACATTATACACATATGAGGGTAGATATGAAATTCAATATTTATCTGGCTTGTTCAAGCCAAAGGAAAGTCGTGGAAGGTGGCTTAGATCTGGTGGCATGAATGTTTCTTTAGTGGATCTAGATGGACATGTTGTTGGTGGTCGCGTAGCTGGTCCATTGGTGGCTGCAAGTCCTGTAACTGTAATGGTAGTTCCTTTTCTTGAAAGTGAACAACATAAGCAGAAGCTAAAAACACACAAGAATGAGGTAATTTCAACATTAACGCCAACGGTAGCTGCTCCTGTGTCTACTGTTGGTCCAATGCCTAATAATTTCTCATCTTCATCTTGCTTCCTTGGAGATAATTGGTACTCAATCCGAGCAGTGGAAGATACTAGAAATAACTCAATTGACATTAATGTACCATTTCATGGAAGTTGA 828 0.4106 MPNESHDGGISVSLSGLDRRFIGGLVAGPLVAASPVTVVVGCFLANEQHEHKLKKQKNEVTSIVTPMEAVPVSTAGQLFASSIRATFTPHIIIVNAGEDVIMKVMTFCPQTPVAIRIISANGVTSRATIDRPQASGTLYTYEGRYEIQYLSGLFKPKESRGRWLRSGGMNVSLVDLDGHVVGGRVAGPLVAASPVTVMVVPFLESEQHKQKLKTHKNEVISTLTPTVAAPVSTVGPMPNNFSSSSCFLGDNWYSIRAVEDTRNNSIDINVPFHGS* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1630 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 3 68 - -
Mal6g1630 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 210 - -
Mal6g1630 275 Gene3D - 89 221 - -
Mal6g1630 275 ProSiteProfiles PPC domain profile profile. 84 226 IPR005175 -
Mal6g1630 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 68 IPR039605 GO:0003680
Mal6g1630 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 78 271 IPR039605 GO:0003680
Mal6g1630 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 78 271 - -
Mal6g1630 275 CDD DUF296 88 202 IPR005175 -
Mal6g1630 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 202 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1630 Mal-Chr6 30206728 30208960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1630 1 75 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 46.250 7.27e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1630 - - mtr:MTR_5g011610 242.662