Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1629 ATGGAGGGTGCTAGTATTAGCAATAGTGATGCTTCAGATACTCCAACAGATTCCCATGCAGCTCCAAGAACTGGTGGATCCGCGGCTGATTCGACATCTCAGGGAGGCATTCTACCTCTGCAGACGGTGGCGCCAGCAAAGAAGAAAAGGGGTCGCCCTAGAAAGTATGGACCAGACGGATCTTTAAACTTAGCGATTTCTCCGAAGCCAACATCTAGCTCCATCGGCAAAGCTGCCAAATTCGAGTTGGAGAATCCAGGCCAATTGCTTGCAAGCTCAGTTGGCACTATAGTAAATTTAGACCCTCATGAGGACACTATTGAAGATCAAACTCAACACTCTCAAGAACTAAAGTATCAGGATGTTACTATGAAGGTAATGTCATTTTGTCAGCAAGGACCAGAAGCTATGTGCATCCTATCTGCAAATGGAGTCGTATCAAGCGCCACCATTAGTCAGGCTCAATCGTCTGAAAAATTATTCACATATGAGGGTAAATATGAAATTATATCTTTATCTGGATCGTTTATGCCAAACGAAAGTCACGGCGGTGGCATGAGTGTTTCTTTATCGGGTCTAGATGGACGTGTTGTTGGCGGTCGCGTAGCTGGTCCATTGGTGGCTGCAAGTCCTGTAAATGTGGTGGTAGGCAATTTTCTGGCAAATGAACAGCCTGAGCATAAGCTAAAAACGCAGAAAAATGAGGTAACTTCAATCGTAACGCCAACAACAGCTGCTCCCGTGTTTACTTCTGGTACAATACCTAACCTCTCATCTTCATCTTCCTTCCATCGAGATAATTCTCTTTCTTTGTGCATGAGTATCAAGAATAGTGTATTTTGTTGTTCGGAATGA 855 0.4421 MEGASISNSDASDTPTDSHAAPRTGGSAADSTSQGGILPLQTVAPAKKKRGRPRKYGPDGSLNLAISPKPTSSSIGKAAKFELENPGQLLASSVGTIVNLDPHEDTIEDQTQHSQELKYQDVTMKVMSFCQQGPEAMCILSANGVVSSATISQAQSSEKLFTYEGKYEIISLSGSFMPNESHGGGMSVSLSGLDGRVVGGRVAGPLVAASPVNVVVGNFLANEQPEHKLKTQKNEVTSIVTPTTAAPVFTSGTIPNLSSSSSFHRDNSLSLCMSIKNSVFCCSE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1629 284 MobiDBLite consensus disorder prediction 1 72 - -
Mal6g1629 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 219 IPR005175 -
Mal6g1629 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 26 258 - -
Mal6g1629 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 221 - -
Mal6g1629 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 258 IPR039605 GO:0003680
Mal6g1629 284 Gene3D - 117 239 - -
Mal6g1629 284 ProSiteProfiles PPC domain profile profile. 105 243 IPR005175 -
Mal6g1629 284 MobiDBLite consensus disorder prediction 1 39 - -
Mal6g1629 284 CDD DUF296 120 219 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1629 Mal-Chr6 30203773 30205421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1629 47 268 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 44.402 1.09e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1629 - - mtr:MTR_5g011620 317.005