Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1608 ATGAATGATCTAATGACAAAATCATTCACCAACTATGTTGATCTAAAAAAAGCAGCTATGAAAGATGAAGTTGATTTAGAAGCTGGTCTTCATGAAAAACAAGGTGGTGTTGAATTAACAAGATCTTCATTGACCCATTTGGAAACTGATATGAATTTGTTCTTAGAAGAGGCAGAAAAAGTAAGAACAGAAATGGGTGAAATTCGCGATGTACTAACAAAGCTCGAAAAAGCAAATGAAGAGAGCAAGTCACTTCACAAAACTGAAGCTTTGAAATCATTGAGGGAAAGAATTAATACTGATATTGTAACTGTTTTGAAGAAAGCAAGGTGTATTAGGACTCAGTTAGAAGAAATGGATCGCGCGAATGATGCTAATAGAAGACTCTCTGGACTTAAAGATGGTTCACCGGCAATTTATAGAACTAGAATTGCTGTTACTAATGGCTTGCGTAAGAAGCTCAAGGAGCTTATGATGGAGTTTCAGGGGCTGAGGCAGAGAATGATGAGTGAGTACAAAGAAACAGTAGGGAGAAGGTACTATACAGTGACAGGGGAACATGCAGATGAAGAGGTAATTGATAAGATAATATCAAATGGAGATGATGAAAGTTTCTTAGGAAAGGCGATACAAGAACATGGAAGAGGGAAAGTTCTAGAAACTGTGGTTGAGATACAAGACAGGCATGATGCAGCAAAAGAGATTGAGAAGAGTTTGTTGGAACTTCATCAAATATTTTTGGATATGGCTGTGATGGTTGAAGCACAAGGTGAAAAAATGGATGATATTGAACATCATGTTCTTCATGCTTCTCATTATGTTAAAGATGGTACAAAGAATCTTCAAGGTGCTAAAAAATATCAGAAAAGTAGTAGGAAGTGGATGTGCATTGGGATGATACTTTTGCTTATTATTATTCTCATCATTGTTATTCCCATTGTCACTAGTTTCAGCAGTTCTTAA 963 0.3624 MNDLMTKSFTNYVDLKKAAMKDEVDLEAGLHEKQGGVELTRSSLTHLETDMNLFLEEAEKVRTEMGEIRDVLTKLEKANEESKSLHKTEALKSLRERINTDIVTVLKKARCIRTQLEEMDRANDANRRLSGLKDGSPAIYRTRIAVTNGLRKKLKELMMEFQGLRQRMMSEYKETVGRRYYTVTGEHADEEVIDKIISNGDDESFLGKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQIFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNLQGAKKYQKSSRKWMCIGMILLLIIILIIVIPIVTSFSSS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1608 320 Gene3D - 218 317 - -
Mal6g1608 320 ProSitePatterns Syntaxin / epimorphin family signature. 228 268 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mal6g1608 320 Coils Coil 147 167 - -
Mal6g1608 320 CDD SNARE_syntaxin1-like 221 282 - -
Mal6g1608 320 Coils Coil 58 78 - -
Mal6g1608 320 Pfam Syntaxin 54 257 IPR006011 GO:0016020
Mal6g1608 320 CDD SynN 54 198 IPR006011 GO:0016020
Mal6g1608 320 Pfam SNARE domain 259 310 IPR000727 -
Mal6g1608 320 SMART tSNARE_6 217 284 IPR000727 -
Mal6g1608 320 Gene3D - 51 179 - -
Mal6g1608 320 PANTHER SYNTAXIN 5 313 IPR045242 -
Mal6g1608 320 SMART SynN_4 46 173 IPR006011 GO:0016020
Mal6g1608 320 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 222 284 IPR000727 -
Mal6g1608 320 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 5 313 - -
Mal6g1608 320 SUPERFAMILY t-snare proteins 49 277 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1608 Mal-Chr6 29928965 29930106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1608 1 320 SNARE and Associated Proteins AT1G08560 64.798 4.50e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1608 K08486 - gmx:100816016 508.834