Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1604 ATGAACAATTTCTCACACGTTCCTCCTGGATTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATCACTACCTTAGGAAAAAGATAGCTTCTAAAAGGATTGATCTTGATATCATTAAAGATGTCGATCTCTATAAAATTGAGCCTTGGGACCTACAAGAATTATGCAAAATAGGAAGTGATGAACAAACTGAATGGTACTTTTTCAGTCATAAAGATAAGAAGTATCCAACTAGCAGTCGTACAAACAGGGCTACAAAAGCAGGATTCTGGAAAGCTACAGGAAGAGACAAAGCAATTTATTCTAACCATATTTGTCTTATTGGAATGAGAAAGACTCTAGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAGAAATCTGATTGGATCATGCATGAATACCGCTTAGAAACTAATGAAAATGGAACTACTCCTCAGGAAGAAGGATGGGTTGTGTGTAAAGTGTTCAAGAAACGAATAGCTACAACAATGAGGAGAATGGATGAGTCACCATGTGGATATGATGATCAAGTATCATTCATGCAAGAACTTGAATCACCAAACAGAGTTTCTTCTCACCCTTATGCACCATACCAACAACACTACCCTTGCAAACAAGAGTTGGATCAATTGCATTACAATATGTCCATTAATGATGCTAACAATTTCCTCCAACTTCCACAACTAGAAAGTCCCAAAGTTCCTTTGCATTGCTCATCATCATCACATTCACTCACTCAAGAACAACAATATTATAGCCAACAACAAAATATGCAATTGCTTTATGGTGGTAGCAATGATTTACAAGCTGTAGTGGAGCAATCAAGGGAATGGCAAGTACTTGATAAATTTGTTGCTTCTCGGCTAAGTAATGATCAAGATGCTTCTAAGGGAACTAATAGTTATTGTAATGTGGCTGAACAAATTGCTTTGCTTGCAAATGATGAATCGAAAAAATCGGAAACTGGCCAGGAATATGCAACTTCAACGTCCAACTCCAGTTGCCAGATTGATCCGTGGAAGTGA 1026 0.3801 MNNFSHVPPGFRFHPTDEELVDHYLRKKIASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEQTEWYFFSHKDKKYPTSSRTNRATKAGFWKATGRDKAIYSNHICLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPQEEGWVVCKVFKKRIATTMRRMDESPCGYDDQVSFMQELESPNRVSSHPYAPYQQHYPCKQELDQLHYNMSINDANNFLQLPQLESPKVPLHCSSSSHSLTQEQQYYSQQQNMQLLYGGSNDLQAVVEQSREWQVLDKFVASRLSNDQDASKGTNSYCNVAEQIALLANDESKKSETGQEYATSTSNSSCQIDPWK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1604 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 322 - -
Mal6g1604 341 MobiDBLite consensus disorder prediction 314 341 - -
Mal6g1604 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 322 - -
Mal6g1604 341 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Mal6g1604 341 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Mal6g1604 341 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Mal6g1604 341 MobiDBLite consensus disorder prediction 323 341 - -
Mal6g1604 341 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1604 Mal-Chr6 29880534 29882319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1604 1 338 NAC Transcription Factor Family AT1G62700 53.750 1.69e-130 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g1604 NAM 5.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1604 - - pop:18093982 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1604 6 29880534 29882319 Mal6g1604 6 29880534 29882319 ECH
Mal6g1604 6 29880534 29882319 Mal5g3902 5 108348725 108352606 PCT