Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1564 ATGGTGAAGATAGGTTTTGGTACATTTGATGACTCTTTTAGCATTGCCTCCCTTAAGGCTTATCTATCAGAGTTCATTGCCACTCTCATTTTTGTGTTCGCAGGAGTTGGATCAGCAATTGCTTACAATAATCTTACGTCAGATGCAGCCTTGGACCCAGCGGGTTTAGTGGCAGTAGCTGTGGCTCATGCATTTGCACTATTTGTTGGTGTGTCCATAGCAGCCAACATCTCAGGTGGACATTTGAACCCAGCTGTAACTTTTGGACTAGCTATTGGAGGCAACATCACCATCCTAACTGGTCTCTTCTATTGGATTGCCCAATTGCTTGGCTCCATTGTTGCATCTCTCCTCCTCAATTATGTCACCGCTAAGAGTGTTCCAACCCATGGAGTGGCTGCTGGATTGAACCCTATTGCTGGCTTAGTGTTTGAGATTATCATAACATTTGGGTTGGTTTACACTGTGTATGCCACAGCAGCTGACCCCAAAAAGGGATCAATTGGAACCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCCAACATCTTAGCCGCCGGTCCATTCAGCGGCGGTTCAATGAACCCGGCTCGCTCATTCGGCCCAGCTGTGGTTAGTGGAAACTTTGCTGATAACTGGATCTACTGGGTTGGACCATTGATAGGAGGAGGTTTGGCTGGGTTGATTTATGGTGACGTCTTCATTGGTTCATATACTCCTGCACCAGCATCTGAATTCTGA 744 0.4677 MVKIGFGTFDDSFSIASLKAYLSEFIATLIFVFAGVGSAIAYNNLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVASLLLNYVTAKSVPTHGVAAGLNPIAGLVFEIIITFGLVYTVYATAADPKKGSIGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDVFIGSYTPAPASEF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1564 247 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Mal6g1564 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 SUPERFAMILY Aquaporin-like 15 238 IPR023271 -
Mal6g1564 247 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mal6g1564 247 PANTHER AQUAPORIN-8 1 246 IPR034294 -
Mal6g1564 247 PANTHER AQUAPORIN TIP2-2-RELATED 1 246 - -
Mal6g1564 247 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1564 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1564 Mal-Chr6 28794748 28795959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1564 1 246 Major Intrinsic Protein MIP AT5G47450 79.757 5.22e-137 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1564 6 28794748 28795959 Mal6g1564 6 28794748 28795959 ECH