Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1552 ATGTCAGGTGAAGAAGAGGTTGTTGCAGTTGAGCCTGTTGCTGCTGCTGCTGCTGCTGCAATTCCAGGCGAGCCAATGGACATCATGACTGCCCTACAACTTGTGCTTAGAAAGTCACGAGCTTACGGCGGTCTTGCACGAGGTCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAGCTTTGTGTTCTAGCTGAAGATTGTGACCAACCTGATTATGTCAAACTGGTGAAAGCCCTTTGCGCAGAGCACAATGTTAGCCTGTTGACAGTTCCAAGTGCTAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAGATTGATTCTGAAGGTAAAGCTAGGAAGGTTACCGGATGCTCTTGCGTGGTTGTCAAGGATTTTGGAGAGGAACACGAAGCCTATAATGTTGTTTTGCAGCATGTAAAAGCTAACTAA 438 0.4703 MSGEEEVVAVEPVAAAAAAAIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKAN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1552 145 PANTHER 40S RIBOSOMAL PROTEIN S12 1 144 - -
Mal6g1552 145 PRINTS Ribosomal protein S12E family signature 90 111 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 PRINTS Ribosomal protein S12E family signature 49 65 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 PRINTS Ribosomal protein S12E family signature 35 48 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 PRINTS Ribosomal protein S12E family signature 115 128 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 ProSitePatterns Ribosomal protein S12e signature. 31 49 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 PANTHER 40S RIBOSOMAL PROTEIN S12 1 144 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mal6g1552 145 Gene3D - 9 145 IPR029064 -
Mal6g1552 145 SUPERFAMILY L30e-like 25 143 IPR029064 -
Mal6g1552 145 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 31 124 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1552 Mal-Chr6 28734906 28736291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1552 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 71.034 6.60e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1552 K02951 - gmx:100500093 256.914