Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1538 ATGGCTTCTTCTTCTTCTACCCTATACATAATTTCCATTCTATTTCTTCAATTTATGCTAGTCTTTGGAAACGTTACTAGAAGTTCTACACTCTCCACCACCAACAACAATTCATGGCTATCACCTTCTGGCGATTTCGCTTTCGGATTTCGACAACTTAGTACAACAACAAACCTCTTCATGCTTGCAATATGGTACAACAACATACCTGAGAAAACCATTGTTTGGAGTGCCAAAAACACAAACAACAACAACCTCGTACAAGCACCAACAGGATCACAGATTCAGCTAACATCAGGAGGACTCACGTTGACAACTCAACAAGGTGAATCCATTTGGACAGCACAACCAAACATAGCTGTTTCATATGGAATCATGCTTGACACTGGAAACTTTGTTCTTGTGAACAAGAATTCTACTATTGTTTGGGAAAGTTTCAAGTTTCCTACAGATACCCTTTTGCCTAATCAATCTCTTGAATTAGGTGGAGTTTTAACTTCAAGATTCTCAGAGAACAATTACACAAGTGGAAGGTTTCAACTTTATTTTAATGATGATGATCATAATCTCATGTTAAGTCCACTTGCATGGCCTACTCAATTACGTTACAAATTTTACTATAGAATTGATGTTAAAAACTCTGCATCTCCAAGTTTAGTTTTTGATGAATCAGGAGATGTTTATGTGGAAGCAAATAATAATGGTACTACTAGAATGAAACCTCAGGGTGAAAAATGGATAAATTTAAATCTTGATCCTAAGTTATATTATTATAGAGCAACACTTGATTATTATGGAGTTTTCACACAATATTCTCATCCAAAGGACACTAAAGCAAAACAAGCATGGACTGTTATGAGGTATGTTCCTGATAACATTTGCATTGCTATATTCAATGAACGGGGTAGTGGAACTTGTGGCTATAATAGCTATTGTTCCATAGAAAATCAGAGACCTACTTGTAAATGTCCTTATGGTTATTCATTGATAGATCCAAGTAATCAATTTGGTGGGTGTCAAATCAATTTCACACTTGGTTGTGGAGGTGATAATGGTGAAGGATTGAATGCGAAGCCAGAAGAGTTATATGAGTTTACTGTTCTAAGAGATGTGGATTGGCCTTTATCAGATTATGAACAGATGCAGCCTTATTCTCAACAGGATTGTCAACAATCTTGTTTGCATGATTGCATGTGTGCTGTTGCAGTTTTCAATAACAATACTTGTTGGAAGAAAAGATTGCCTATTGCTAATGGAAGAGCACAAAGTGGTGGACAATTGGTACTTGTGAAAACAAGAGTTTCTCCTCTTGGTTCTTCTTCAACTACACATGATTCAAAGAAAGACGACCGAGTTAAGTCGATTCTTCAAGGTTTACTTATTGGTTCCACTGTCTTCAATAGCATACTCTTGGCTGCAGTTGTTTTCATAACTTTGTTGAAGCCGACAAGGGTTGTCCAAGCTGCAACCCTAGTGGAAACAAATTTATGTTCATTTAGTTATGACGCGTTAAAAGAAGCTACATGGGGTTTTAGTGAAGAACTAGGTAGAGGGTCCTTTGGAATTGTTTACAAAGGAGAGTTAAAAGCAGGAGCATCTTGCAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGCGCAGGATCGCGAGAAGGAATTTAAGACTGAGTTGAGAGCCATTGGAAAAACCTGCCACAAAAACTTGGTAAGGTTGGTTGGATTTTGTGATGAGGGAATGCATAGAATGTTGGTTTATGAGTTCATGAGCAATGGTAGTCTTGCAAATATCTTGTTTGGACAAACCAAACCCATTTGGAATCAAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTATTTACATGAAGAGTGTGACACTCCTATTATTCATTGTGACATAAAGCCTCAAAATATACTCATAGATGAGTACTTTACGGCGAAGATATCCGACTTTGGTTTGGCCAAGTTGTTATTGGCCGATCAAAGCAGAACAAATACAATGATCCGAGGAACGCAGGGATATGTCGCTCCTGAATGGTTCAAGAATGTTCCTGTGACGGCTAAAGTGGATGTTTACAGCTTTGGTGCCATGTTGTTGGAAATTGTTTGCTGTAGAAAAAGTGCGGTGCTGATGGAGTCAGGGGAGGAAGAGAAGGCAATTTTGACAGATTGGGCTTGTGATTGTTATATGGAAGGGAGAATAGATGCTTTGGTGGAGAATGATCAAGAGGCCTTGGATGACATTCACAGGTTTGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCAAGAACATCCTGAAATGAGGCCAACAATGAGGATGGTCATGCAAATGCTAGAAGGTGTGGCTCAAGTCCCTAACCCACCATCGCCTTTTTCCTTCAGTTCGATTCCTTGA 2403 0.387 MASSSSTLYIISILFLQFMLVFGNVTRSSTLSTTNNNSWLSPSGDFAFGFRQLSTTTNLFMLAIWYNNIPEKTIVWSAKNTNNNNLVQAPTGSQIQLTSGGLTLTTQQGESIWTAQPNIAVSYGIMLDTGNFVLVNKNSTIVWESFKFPTDTLLPNQSLELGGVLTSRFSENNYTSGRFQLYFNDDDHNLMLSPLAWPTQLRYKFYYRIDVKNSASPSLVFDESGDVYVEANNNGTTRMKPQGEKWINLNLDPKLYYYRATLDYYGVFTQYSHPKDTKAKQAWTVMRYVPDNICIAIFNERGSGTCGYNSYCSIENQRPTCKCPYGYSLIDPSNQFGGCQINFTLGCGGDNGEGLNAKPEELYEFTVLRDVDWPLSDYEQMQPYSQQDCQQSCLHDCMCAVAVFNNNTCWKKRLPIANGRAQSGGQLVLVKTRVSPLGSSSTTHDSKKDDRVKSILQGLLIGSTVFNSILLAAVVFITLLKPTRVVQAATLVETNLCSFSYDALKEATWGFSEELGRGSFGIVYKGELKAGASCNVVAVKRLDRLAQDREKEFKTELRAIGKTCHKNLVRLVGFCDEGMHRMLVYEFMSNGSLANILFGQTKPIWNQRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTNTMIRGTQGYVAPEWFKNVPVTAKVDVYSFGAMLLEIVCCRKSAVLMESGEEEKAILTDWACDCYMEGRIDALVENDQEALDDIHRFEKWIKIAIWCIQEHPEMRPTMRMVMQMLEGVAQVPNPPSPFSFSSIP* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1538 800 CDD PAN_AP_plant 343 432 - -
Mal6g1538 800 SMART serkin_6 509 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1538 800 PIRSF SRK 1 799 IPR024171 GO:0004674
Mal6g1538 800 Gene3D - 25 147 IPR036426 -
Mal6g1538 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Mal6g1538 800 Gene3D Phosphorylase Kinase; domain 1 476 587 - -
Mal6g1538 800 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Mal6g1538 800 SUPERFAMILY Protein kinase-like (PK-like) 495 782 IPR011009 -
Mal6g1538 800 Pfam Protein kinase domain 512 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1538 800 SMART blect_4 30 149 IPR001480 -
Mal6g1538 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 199 IPR036426 -
Mal6g1538 800 CDD STKc_IRAK 515 783 - -
Mal6g1538 800 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 798 - -
Mal6g1538 800 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 798 - -
Mal6g1538 800 Pfam D-mannose binding lectin 73 161 IPR001480 -
Mal6g1538 800 ProSitePatterns Protein kinases ATP-binding region signature. 515 540 IPR017441 GO:0005524
Mal6g1538 800 Gene3D Transferase(Phosphotransferase) domain 1 588 789 - -
Mal6g1538 800 Pfam PAN-like domain 364 410 IPR003609 -
Mal6g1538 800 ProSiteProfiles Protein kinase domain profile. 509 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1538 Mal-Chr6 28500164 28502566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1538 440 786 Receptor kinase-like Gene Family AT5G45780 38.268 2.24e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal6g1538 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1538 - - gmx:100775269 1055.82