LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g1528	ATGGCTTCTTCCTCTACACTTTACATAATTTCCATTCTTTTTCTTCAACTTGTGCTAGCCTTTGGAAACGTTACTCTAAGTTCAAGACTCTCCACCACTAACAACAACAATAATCCATGGCTATCACCTTCTGGTGAATTTGCTTTCGGATTTCGTAATACCACAACAAACTTCTTCATGCTTGCAATATGGTACAACAAAATACCTGAAAAAACCATTGTTTGGAATGCCAAAGACATGAACAACAACAATAACCTCGTACAAGCACCAACAGGATCACAGGTTCAGCTAACATCGGGTGGACTCACGTTGACAAATCCGCAAGGTGAATCCATTTGGACAACACAACCAAACGATGTTGTTTCCTATGGAACCATGCTTGATAATGGAAACTTTGTTCTTGTAAACAATAAATCGACTATTGTTTGGGAAAGTTTCAAGTTTCCTACTGATACCCTTTTGCCTAATCAATCTCTTGAATTAGGTGGAAACTTAACTTCAAGATTCTCAGAGACCAATTACACAAGTGGAAGGTTCCAACTTTATTTTAATGATGATGATCATAATCTAATGTTAAGTCCACTTGCATGGCCTACTCAATTTCGTTACATATCTTATTATACAATTGATGTTAATAACTCTGCTTCTTCAAGTTTAGTATTTGATGAATCAGGAGATATTTATGTGGAAACAAATAATAATGGTACTACTAGAATCAAACCTCAGGGAACACAATGGAAAAATTTAGCTCTTGATCCTATGTTGTATTATTATAGAGCAACACTTGATTATTATGGAGTTTTCACACAATATTCTCATCCAAGGGACACTAAAGCAAAACAAGGATGGACTATTATGAGGAATGTTCCTGATAACATTTGCTTTGCTATATTCAATGAAATGGGTGGTGGTACTTGTGGTTATAATAGCTATTGTTCCATGGAAAATCAGAGACCTACTTGTAAATGTCCTTATGGTTATTCATTGATAGATCCAAGTAATCAATTTAGTGGCTGTCAACTCAATTTCACACTTGGCTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAAACCAGAAGATTTATATGAGTTTACTGTTCTTACAAATGTAAATTGGCCTTTATCAGATTATGAACGGATGCAGCCTTATTCTCAACAGGACTGTCAACAATCTTGTTTGCATGATTGTATGTGTTCTGTTGTTGTCTTCAGTAACCAAAATTGTTGGAAGAAAAGATTGCCTCTTGCTAATGGAAGAGAAGAAAGTGGTGGTAGTTTAGTACTTATCAAAACAAGAGTTTCGCCTCTTGGTAAAATAGGCACTAGTCCTTCCACAGATTCGAAGAAAGACGACCGAGTTAAGCCTATTCTTCAAGGTTTACTTATTGGTTCCACTGTCTTCAATAGCATACTCTTAGCTGCGGTTGTTTTTATGACTTTGTTGAAGCCGAAAAGGGTTGTCCAAGTTGCAACTCTAGTAGAGACAAATTTATGTTCACTTAGCTATGACGTGTTAAAAGAAGCTACATGGGGTTTTAGTGAAGAACTAGGTAGAGGGTCCTTTGGAATTGTTTACAAAGGTGAGTTAAAAGCAGGAGCATCTTGCAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGCGCAGGATCGCGAGAAGGAATTTAAGACTGAGTTGAGAGCCATTGGAAAAACCTGCCACAAAAACTTGGTAAGGTTGGTTGGATTTTGTGATGAGGGAATGCATAGAATGTTGGTTTATGAGTTCATGAGCAACGGTAGTCTTGCAAATATCTTGTTTGGACAAACCAAACCCATTTGGAATCAAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTATTTACATGAAGAGTGTGACGTACCTATTATTCATTGTGACATAAAGCCTCAAAATATACTAATAGATGAGTACTTTAGGGCGAAGATATCCGACTTTGGTTTGGCCAAGTTGTTGTTGGCTGATCAAAGTAGAACAAATACAATGGTCCGAGGAACACGAGGTTATGTGGCTCCTGAGTGGTTCAAGAATGTTCCAGTGACGGCTAAAGTGGATGTTTACAGCTTTGGTGCCATGTTGTTGGAAATTGTTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGTCGGGAGAGGAAGAGAAGGCAATTTTGATAGATTGGGCTTGTGATTGTTATATGGAAGGGAGAATTGATGTTTTGGTGGAGAATGATCAAGAGGCCTTGGATGACATTGACAGGTTAGAAAAGTGGATAAAGGTAGCAATTTGGTGCATTCAAGAACATCCTGAAATGAGGCCAACAATGAGGATGGTCTTGCAAATGCTAGAAGGTGTGGTTCAAGTCCCTAACCCACCGTCGCCTTTTTCCTTCAGTTTGTGA	2403	0.3837	MASSSTLYIISILFLQLVLAFGNVTLSSRLSTTNNNNNPWLSPSGEFAFGFRNTTTNFFMLAIWYNKIPEKTIVWNAKDMNNNNNLVQAPTGSQVQLTSGGLTLTNPQGESIWTTQPNDVVSYGTMLDNGNFVLVNNKSTIVWESFKFPTDTLLPNQSLELGGNLTSRFSETNYTSGRFQLYFNDDDHNLMLSPLAWPTQFRYISYYTIDVNNSASSSLVFDESGDIYVETNNNGTTRIKPQGTQWKNLALDPMLYYYRATLDYYGVFTQYSHPRDTKAKQGWTIMRNVPDNICFAIFNEMGGGTCGYNSYCSMENQRPTCKCPYGYSLIDPSNQFSGCQLNFTLGCGADNGEGLNVKPEDLYEFTVLTNVNWPLSDYERMQPYSQQDCQQSCLHDCMCSVVVFSNQNCWKKRLPLANGREESGGSLVLIKTRVSPLGKIGTSPSTDSKKDDRVKPILQGLLIGSTVFNSILLAAVVFMTLLKPKRVVQVATLVETNLCSLSYDVLKEATWGFSEELGRGSFGIVYKGELKAGASCNVVAVKRLDRLAQDREKEFKTELRAIGKTCHKNLVRLVGFCDEGMHRMLVYEFMSNGSLANILFGQTKPIWNQRVGFALGIARGLVYLHEECDVPIIHCDIKPQNILIDEYFRAKISDFGLAKLLLADQSRTNTMVRGTRGYVAPEWFKNVPVTAKVDVYSFGAMLLEIVCCRKSVVLMESGEEEKAILIDWACDCYMEGRIDVLVENDQEALDDIDRLEKWIKVAIWCIQEHPEMRPTMRMVLQMLEGVVQVPNPPSPFSFSL*	801

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal6g1528	800	PIRSF	SRK	1	800	IPR024171	GO:0004674
	Mal6g1528	800	Gene3D	-	24	147	IPR036426	-
	Mal6g1528	800	Gene3D	Phosphorylase Kinase; domain 1	475	589	-	-
	Mal6g1528	800	SMART	serkin_6	511	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1528	800	Pfam	PAN-like domain	364	405	IPR003609	-
	Mal6g1528	800	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	9	799	-	-
	Mal6g1528	800	ProSitePatterns	Protein kinases ATP-binding region signature.	517	542	IPR017441	GO:0005524
	Mal6g1528	800	ProSiteProfiles	Bulb-type lectin domain profile.	25	147	IPR001480	-
	Mal6g1528	800	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	632	644	IPR008271	GO:0004672\|GO:0006468
	Mal6g1528	800	Gene3D	Transferase(Phosphotransferase) domain 1	590	789	-	-
	Mal6g1528	800	Pfam	D-mannose binding lectin	72	161	IPR001480	-
	Mal6g1528	800	ProSiteProfiles	Protein kinase domain profile.	511	787	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1528	800	SUPERFAMILY	Protein kinase-like (PK-like)	499	784	IPR011009	-
	Mal6g1528	800	SMART	blect_4	31	149	IPR001480	-
	Mal6g1528	800	SUPERFAMILY	alpha-D-mannose-specific plant lectins	59	199	IPR036426	-
	Mal6g1528	800	Pfam	Protein kinase domain	514	781	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1528	800	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	9	799	-	-
	Mal6g1528	800	Gene3D	-	148	280	IPR036426	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal6g1528	Mal-Chr6	28385683	28388085	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal6g1528	497	788	Receptor kinase-like Gene Family	AT5G45780	42.953	1.20e-67	233

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mal6g1528		Pkinase	1.5e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g1528	-		-	gmx:100775269	1061.98