Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1513 ATGAATTCGGAGCAATCAATGTCGGTTTGTAATGGACATTCTGAGGAAGAATTAGGGAAGTCAGTGATGGAAAATGGGGAATCAACTATTGTTAATCGGCCTAAGTTTAAGCGTCGGAAAATTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGATGGTACGAGTGGCGAAGATTTAGGTGGTGGTGATTCTGGTGAAGCTCATAGTCCCAACCATGAGAAGGATCCTCAAAATTCTGAGTTAAATGAGGATTTGTTTGTTACAAACACCGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGAATGGGGATGCTTTGGCTAACGATGAACCTGCAATAGTGGAATTGATGGGCGTGGAAGCTATGGATATGAAATTTGAAACTGAAGATTGTAGCTTGAAAGAGGAAGATCCTGCGGTCTTATCTGATCAAGTGGATGGAGATAGTTTGGCTAACGATGAACCTGCAAAAATGGAATTGGTGGGCGTGGAAGCGATGGATATGAAATTTGAAACTGAAAATTGTAGCTTGAAAAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGGGGATAGTTTGGCCACCGATGAACCTGCAAAAGTGGAATTGGTGGGTGTGGAAGCAATGGATATGAAATTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGATCTCATCTCATGAAGTGGATGATCCTATCTTGGGTAATAACGAAGAGGCAAAAGGCACAGTGGTGGGCGTGGAGACTTTGGATGGAGATATTTTGGCTAACGATGAACCTGAAGTGGAATTGGTGGGCATGGAAGCTTTGGATATGAAATTTGAAACTGAAGACTGTAGCTTAAAAAAGGAAGATCCCGTGGTCTCATCTCATCAATTGGATGATCCTATTTTGGGTAATAACGAAGAGGCAAAAGTCACAGTGGTGGGCGTGGAGACTTTGGATGCGGAATTTGCAACTGAAAGCTGTGGTTTGAAGAACGAAAATCCAGTGATCTCATCCCATCAAGTGGATGAGTCTACTTTGGCAAATGATGAACCAGCAAAACTGCCATTGGTGGGCATGGAAACTTTGGATATGGAATTTGGAACAGAAGAATCCGTAAAACAAGATTTATCTTATAAATCAAAGGTACCATCTCCAGTTGGTGAGGTAGCTATGTCTGATGACTCAAAATCCATGTTGTCCAATATCAATATAGGTGAATCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCATTCAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTTAGTCAGGATGAGTGTCTAAAGGAGCTCTCTTCTTTGAATAAAAAGAGAGCGGATCAACAAAACTCGGCTGTAGATGTCAGTCCATTGAAAAAAGTTCCTGCCGCTGACGTAAAAGAAGCGGAAAATAATAAGAGAAAGTTTGCTAGCACTGTTCAAGCTGATTCTGAAGGGAATGCTACACAGAGATTCAAGAAGCTGGATGTAGCTGAACCATCTTCTGAGATGAGATTGGCGCTGGATGACACAAGAGAAAAGAACACTATACTTCCTGAAAAACATAATCATCATCATCAGGTTAACATAACTCCTAAGGCATTGGTTAAAGCGGAAAACATGAACACTGTAACGGTTGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTGGATTGTTTGAAGGTCTCATCAGGCAGGATAGTAGTGCAAGGTTTGCCATCTAAATCGGAATTTCCTTTGAGATCTGATATTAGTTCCCCCAAATTTAAACCAACATCAATAGGTGGTACAGATGAAAGGAAGGGAAAGAAAGTTGATTTTTATGCCCAGCTCGACAGGTCTAAAACTGCTACCAAGTCGAAAGGTGTACTGAATCAATCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATAGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGACCCTAATGAAAATAACAAACACCTTAAAAGTGTCCCAAAATCACGTGGTTCGGGTGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTGAGTGGTCATGAGAATGACTCAGTGTCCCGGAATAAAGTGAGGAACGCATTGCGCCTGTTCCAAGCTGTTTATAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGAGAAAGAAAGGAGGAGGTTTGATTTACAAGCTGCGAAAATACTTAAGGAGAAAGAGAGCTATGTTAATGTTAACAAAGGGAAGCAGATCTTGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAACAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAGCACAAAGACAAGATCCTTGCAACTAGTATTGTTGCTTCAGGGGGCTATGCTGATGACTTAGATAATTCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAACAGCAGTGAGGAAAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCAACGGATGGAAAAAGCAGGATATATGTTTATGATGGACTTTATGTAGTTGAGTCATTTTGGCAGGATGTGGGGCCACATGGGAAGCTGGTATATAAGTTTCACTTGCGAAGAATCCCGGGTCAACCAGAGCTTGCTTGGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGTCTATGCGTCGAAGATATTTCCTATGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTGCATTTAAATACATAACTAAGATGATATATCCTGATTGTTGCAATCTTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCATGAGAAATGTTCTTGTGTACTAAAAAATGGGGGGGAGATTCCATTTAATCATAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTTCAACCTGCCATAACAGAGTCAGCCAACTTGGCATAAATCTCCAACTTGAAATTTTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCTTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAAGACAAGGAGGCTGAAAAAAGGACTGGTAATGATGAGTATCTGTTTGATATTGGAAATAACAAAAACAGCAATAATCTTTGGGATGGACTTTCAAATCTTATGCCAGATTCGCACTCAAGTTCAAGTGACGTAGTGAAGGATGTTGGCTTCACTATCGATGCTGCTCAGTTCGGTAATCTGGGGAGATTCATCAACCATAGTTGCTCCCCCAATCTGTATGCCCAGAATGTTCTTTATGATCATCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGTCTTACGATTACAATTACACGATAGATCAAGTCCGTGATTCTGATGGCAATATCAAAAAGAAGTACTGCTTTTGTGGTTCTGTTGAATGTACTGGTTCCCTCTACCGGAGGTAA 3714 0.412 MNSEQSMSVCNGHSEEELGKSVMENGESTIVNRPKFKRRKISAVRDFPEECGPFGSADGTSGEDLGGGDSGEAHSPNHEKDPQNSELNEDLFVTNTVEQTSDCSLKKEDPVVLSDQVNGDALANDEPAIVELMGVEAMDMKFETEDCSLKEEDPAVLSDQVDGDSLANDEPAKMELVGVEAMDMKFETENCSLKKEDPVVLSDQVDGDSLATDEPAKVELVGVEAMDMKFETEDCSLKKEDPVISSHEVDDPILGNNEEAKGTVVGVETLDGDILANDEPEVELVGMEALDMKFETEDCSLKKEDPVVSSHQLDDPILGNNEEAKVTVVGVETLDAEFATESCGLKNENPVISSHQVDESTLANDEPAKLPLVGMETLDMEFGTEESVKQDLSYKSKVPSPVGEVAMSDDSKSMLSNINIGESGACMKEALTKRYPPRKKVAAFRDFPRLCGRNAPRLSQDECLKELSSLNKKRADQQNSAVDVSPLKKVPAADVKEAENNKRKFASTVQADSEGNATQRFKKLDVAEPSSEMRLALDDTREKNTILPEKHNHHHQVNITPKALVKAENMNTVTVEGTSELDIDYPELDCLKVSSGRIVVQGLPSKSEFPLRSDISSPKFKPTSIGGTDERKGKKVDFYAQLDRSKTATKSKGVLNQSGHQPLKKKRENSSSDDIGQLVTREKNSLDPNENNKHLKSVPKSRGSGVNVFPLGRSNLSGHENDSVSRNKVRNALRLFQAVYRKLLQEAEAKPKSNEKERRRFDLQAAKILKEKESYVNVNKGKQILGSVPGVEVGDEFQYRTELNIIGLHRQIQGGIDYVKHKDKILATSIVASGGYADDLDNSDVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEEKNSVRVIRGSESTDGKSRIYVYDGLYVVESFWQDVGPHGKLVYKFHLRRIPGQPELAWKEVKKSKKFKTREGLCVEDISYGKEKIPICAVNTIDNEKPPAFKYITKMIYPDCCNLVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPSTCHNRVSQLGINLQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEKRTGNDEYLFDIGNNKNSNNLWDGLSNLMPDSHSSSSDVVKDVGFTIDAAQFGNLGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELSYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGSLYRR* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1513 1237 MobiDBLite consensus disorder prediction 608 632 - -
Mal6g1513 1237 Pfam SET domain 1073 1205 IPR001214 GO:0005515
Mal6g1513 1237 ProSiteProfiles Post-SET domain profile. 1219 1235 IPR003616 -
Mal6g1513 1237 SMART set_7 1062 1211 IPR001214 GO:0005515
Mal6g1513 1237 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 705 1233 - -
Mal6g1513 1237 CDD SET_AtSUVH-like 981 1206 - -
Mal6g1513 1237 Pfam SAD/SRA domain 785 933 IPR003105 -
Mal6g1513 1237 SUPERFAMILY SET domain 945 1211 IPR046341 -
Mal6g1513 1237 SUPERFAMILY PUA domain-like 776 943 IPR015947 -
Mal6g1513 1237 SMART preset_2 955 1046 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal6g1513 1237 Gene3D SET domain 950 1235 IPR046341 -
Mal6g1513 1237 ProSiteProfiles Pre-SET domain profile. 999 1059 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal6g1513 1237 Pfam Pre-SET motif 958 1054 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal6g1513 1237 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 380 1236 IPR025794 GO:0016571
Mal6g1513 1237 ProSiteProfiles YDG domain profile. 786 929 IPR003105 -
Mal6g1513 1237 SMART G9a_1 781 933 IPR003105 -
Mal6g1513 1237 Gene3D - 766 949 IPR036987 -
Mal6g1513 1237 ProSiteProfiles SET domain profile. 1062 1205 IPR001214 GO:0005515
Mal6g1513 1237 MobiDBLite consensus disorder prediction 1 85 - -
Mal6g1513 1237 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 705 1233 - -
Mal6g1513 1237 MobiDBLite consensus disorder prediction 649 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1513 Mal-Chr6 28192263 28196513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1513 715 1234 Su(var)3-9 homologs AT5G04940 40.075 5.02e-116 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal6g1513 SAD_SRA 9.4e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1513 K11420 - gmx:100803378 1130.93