Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1512 ATGGAACTTAATTTAAAGCACCAATTTGGTGTTATTTGTGCCATATTGCTCTTACCTCTCATGTGTACCTCTCAAGACTCTTTTATTTGCTCTAGAGCAACCTATTATGGTAGCCCAGATTGTTATGGAAATCCAAAGGGAGCTTGTGGCTATGGTGATTATGGACAGACAGTAAATGATGGCAATGTCGCAGGCGTTTCTTGGCTATGGAAGAATGGATCTGGTTGTGGTGCATGCTATCAAGTGAGGTGCAAAATACCAGAATTGTGTGATGACAATGGAGCACATATTGTGGTGACTGATTTTGGTGTGGGAGATAGAACAGACTTCATCATGAGTCCACGTGGCTATTCAAAATTGGGCAAAAATGCTGATGCATCTGCAGAACTCTTTAAATATGGTGTGGTAGATATAGAATATAAAAGAGTCCCTTGCAAATACAATGGCTATAATGTCTTGCTTAAGGTCCATGAACGCAGCAAAAACCCTCACTACTTGGCCATTATCATTCTCTATGTTGGTGGAACAAAGGATGTCACTAATGTTCAATTGTGGCAGGAAGATTGCAAAGAGTGGAGGCCAATGCGTAGGGCGTTTGGGGCAGTGTTTGATGCTGAGAACCCTCCAAGAGGTGAAATTAAGTTGAGGCTCCAAGTGAGTGGTAGTGCTGGATTGTATTGGGTGGAGTCCAAGAATGTTATCTCTAGTGATTGGGAAGCTGGGGCTGTTTATGACTCACAAATTCAGTTTGATTAA 756 0.4193 MELNLKHQFGVICAILLLPLMCTSQDSFICSRATYYGSPDCYGNPKGACGYGDYGQTVNDGNVAGVSWLWKNGSGCGACYQVRCKIPELCDDNGAHIVVTDFGVGDRTDFIMSPRGYSKLGKNADASAELFKYGVVDIEYKRVPCKYNGYNVLLKVHERSKNPHYLAIIILYVGGTKDVTNVQLWQEDCKEWRPMRRAFGAVFDAENPPRGEIKLRLQVSGSAGLYWVESKNVISSDWEAGAVYDSQIQFD* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1512 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Mal6g1512 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Mal6g1512 251 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Mal6g1512 251 SUPERFAMILY Barwin-like endoglucanases 14 149 IPR036908 -
Mal6g1512 251 Pfam Expansin C-terminal domain 154 234 IPR007117 -
Mal6g1512 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mal6g1512 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Mal6g1512 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Mal6g1512 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Mal6g1512 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Mal6g1512 251 PANTHER EXPANSIN-B3 4 250 - -
Mal6g1512 251 Gene3D - 146 247 IPR036749 -
Mal6g1512 251 Gene3D - 20 145 IPR036908 -
Mal6g1512 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Mal6g1512 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1512 Mal-Chr6 28187982 28189721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1512 14 248 Expansin Gene Family AT4G17030 59.322 2.75e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1512 - - gmx:100802855 444.121