Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1509 ATGCTTTTATCTCCTCACGTTCATAAATACAAGATAATATACTATAAATCTTCCACCGCTTTCTCTTCATTCTTCACCTTCTTCAACTTATTTATTCCGTACCAAAAAAACAACATAAATTATCACAACATGACACCTATGAATTTTCAACAACTTCCTCATCTCTTTCTTCAAGAGATTCCATGTTTGGGAAATTCCAGTGTAATGAAGGCTAATATGAAGAAGGAAGAGCAAAGATGTGCTCAAATGACAATATTTTATGATGGGAAAGTAATTGTATTTGATGATATTCCAGCTGAAAAAGCAAAGGACATAATGGACTTTTCCAACAAAGGAATTACTAGTACTTCACAAAACCACCACAACTTTGCTTACTCTTCTTCATTTCTTGCTAGAAATTCTGCCAACAATTCTGTTCAAGTACAATCTATACCTGTTATTTATGATTTACCAATGACTAGGAAAGCTTCACTTCATCGGTTTTTGGAGAAAAGGAAGGATAGAATTGCTGCAAGGGCACCATATCAAACAAGTCCAACAACCATTAATAAGCCAATTGATGAATCCATGGCATGGCTCTCTTTGGCACCACAATCACCACAAGACAAATCTGAGTGTAGCAGTAGCTCCACCTCTGTGTTATTTTAA 648 0.3534 MLLSPHVHKYKIIYYKSSTAFSSFFTFFNLFIPYQKNNINYHNMTPMNFQQLPHLFLQEIPCLGNSSVMKANMKKEEQRCAQMTIFYDGKVIVFDDIPAEKAKDIMDFSNKGITSTSQNHHNFAYSSSFLARNSANNSVQVQSIPVIYDLPMTRKASLHRFLEKRKDRIAARAPYQTSPTTINKPIDESMAWLSLAPQSPQDKSECSSSSTSVLF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1509 215 Pfam Jas motif 151 176 IPR018467 -
Mal6g1509 215 Pfam tify domain 81 107 IPR010399 -
Mal6g1509 215 ProSiteProfiles Tify domain profile. 76 111 IPR010399 -
Mal6g1509 215 PANTHER PROTEIN TIFY 10A 30 196 - -
Mal6g1509 215 SMART tify_2 76 111 IPR010399 -
Mal6g1509 215 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 196 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1509 Mal-Chr6 28074641 28075823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1509 75 196 Tify Gene Family AT1G19180 38.346 1.41e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal6g1509 tify 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1509 K13464 - gmx:100306332 159.073