Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1507 ATGGAGGAAGAACGGTACGAGATATTGAAGGACCTTGGTTCAGGGAATTTTGGTGTTGCTAGGTTGGCCAAAGACAAGAAGACAGGGGAGCTTGTTGCTATCAAATACATTGAAAGAGGACATAAGATTGATGAGAATGTTCAAAGGGAGATAGTTAACCATCGATCTTTGAGGCATCCAAATATTATCAGGTTCAAAGAGTTATTTGTGACACCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTTTTCGACAGGATATGCGCTGCTGGTCGACTTAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTGATATCTGGAGTTAGCTACTGTCATTCTATGCAAATTTGTCACAGAGATCTGAAATTGGAGAACACTCTATTGGATGGAAATCCAGCTCCTAGAGTTAAAATTTGTGACTTTGGTTTCTCCAAGTCTACTTTATTCCACTCTACTCCCAAATCAACAGTTGGAACTCCTGCATACATTGCACCAGAGGTTTTGTCAAGAAAGGAGTATGATGGCAAGATTGCTGATGTTTGGTCATGTGGTGTGACTCTTTATGTCATGTTAGTTGGATCATACCCTTTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGAATATTTCGAAAATAATGAATGTTCAGTACTCCATACCTGACTATGTGCATATCTCTGCGGATTGTAGAGAACTTCTCTCTCGGATTTTTGTTGCCAATCCAGCTAAGAGGATCACAATCTCAGAGATAAAGCAACACCCTTGGTTTAGGAAGAACATGCCTAGAGAGATAGTTGAGGCTACTAGAAAAGGTTACAAGGAAATACAGAAAGAGCATTTACCAAGCCAACAAAGTGTAGAAGATATCATGAGGATCGTAGGAGAAGCAAGAAAACCAGGGCTGAAAAACAAAAGTGGAACAAGCTCATTGGATGTTGTTGAATGGATTGAAGAGGAAGTTGATGCTAGTGGTGATGACTTTGTCCAAGTCCAACTTACGTGA 1020 0.4029 MEEERYEILKDLGSGNFGVARLAKDKKTGELVAIKYIERGHKIDENVQREIVNHRSLRHPNIIRFKELFVTPTHLAIVLEYAAGGELFDRICAAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRVKICDFGFSKSTLFHSTPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGSYPFEDPEDPRNFRKNISKIMNVQYSIPDYVHISADCRELLSRIFVANPAKRITISEIKQHPWFRKNMPREIVEATRKGYKEIQKEHLPSQQSVEDIMRIVGEARKPGLKNKSGTSSLDVVEWIEEEVDASGDDFVQVQLT* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1507 339 PANTHER SERINE/THREONINE KINASE 4 331 - -
Mal6g1507 339 ProSiteProfiles Protein kinase domain profile. 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1507 339 Gene3D Transferase(Phosphotransferase) domain 1 82 270 - -
Mal6g1507 339 SUPERFAMILY Protein kinase-like (PK-like) 4 283 IPR011009 -
Mal6g1507 339 SMART serkin_6 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1507 339 CDD STKc_SnRK2 5 261 - -
Mal6g1507 339 Pfam Protein kinase domain 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1507 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mal6g1507 339 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Mal6g1507 339 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Mal6g1507 339 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 4 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1507 Mal-Chr6 28058785 28061735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1507 5 272 CBL-interacting serine-threonine protein kinases AT4G24400 43.796 8.97e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mal6g1507 Pkinase 4.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1507 K14498 - gmx:100817713 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1507 6 28058785 28061735 Mal6g1507 6 28058785 28061735 ECH
Mal6g1507 6 28058785 28061735 Mal5g3806 5 106633476 106643249 PCT