Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1500 ATGAAGTGTTTCTTCTTCAAACAAAAATCCAAATCAGACCCAGATTTAAACCGTAAAAAGAAGAAAAATCAAGCCAAAAAATCCACAAGTGCACATTCATCACCTAGGAGCATAAAAGAATTGTACAAAGAGAAGGAACACAATTTTAGAGTTTTTACTCTTCAAGAGCTTGTAGATGCAACAAATGGTTTCAATAAGGTGTTGAAGATTGGAGAAGGAGGTTTTGGGAAAGTATATAGAGGAACAATAACTCCTGAAAATGGAATTGGTAACTCAATTGTGGTTGCAATAAAAAAACTCAACACTCGTGGCTTTCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGAATTGTGAATCACCCAAATTTGGTTAAACTTTTGGGATATTGTTCTGTAGATGGTGAAAATATCCAACGGCTGTTAGTGTATGAGCTTATGCCTAATAGGAGTTTAGAAGATCATCTTTTTAGTCGTTCTTTACCTACTTTGCCTTGGAAAATAAGATTGCAAATCATGCTTGGTGCTGCTCAAGGATTACAATATCTACATGAGGGATTAGAAATTCAGGTGATCTATCGAGATTTCAAATCTTCAAATGTGCTGCTGGACAAGAAATTCCACCCCAAACTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACAGGTGACCAAACTCATGTCTCTACTGCGGTAGTTGGGACAAAGGGTTATGCAGCACCAGAGTATATTGAAACAGGTCATTTGAAATCAAAGAGTGACATTTGGAGTTTTGGTGTGGTACTTTATGAAATTCTTACAGGAAGAAGAACAATAGAAAGAACCCTTCCAAAAGATGAACAAAAGCTTTTAGAATGGGTTAAAAACTATCCTGCTGATACTAGCAGATTCAGATTGATAATCGACCCTCGACTCGCGAAGCAATATTCTCTTGATGCTGCTAGGAAAATTGCTAAGTTGGCTGATAGTTGCTTGAAGAAGAATGCTGAAGATAGGCCATCAATGAGGCAGATAGTAGAAAGTTTGAAACAAGCATTGCAATGTTCATAA 1056 0.375 MKCFFFKQKSKSDPDLNRKKKKNQAKKSTSAHSSPRSIKELYKEKEHNFRVFTLQELVDATNGFNKVLKIGEGGFGKVYRGTITPENGIGNSIVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGENIQRLLVYELMPNRSLEDHLFSRSLPTLPWKIRLQIMLGAAQGLQYLHEGLEIQVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTKGYAAPEYIETGHLKSKSDIWSFGVVLYEILTGRRTIERTLPKDEQKLLEWVKNYPADTSRFRLIIDPRLAKQYSLDAARKIAKLADSCLKKNAEDRPSMRQIVESLKQALQCS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1500 351 PANTHER RECEPTOR-LIKE KINASE PLANT 11 349 - -
Mal6g1500 351 Gene3D Phosphorylase Kinase; domain 1 35 148 - -
Mal6g1500 351 MobiDBLite consensus disorder prediction 1 37 - -
Mal6g1500 351 Pfam Protein kinase domain 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1500 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mal6g1500 351 ProSitePatterns Protein kinases ATP-binding region signature. 70 99 IPR017441 GO:0005524
Mal6g1500 351 PANTHER OS01G0588500 PROTEIN-RELATED 11 349 - -
Mal6g1500 351 MobiDBLite consensus disorder prediction 1 20 - -
Mal6g1500 351 ProSiteProfiles Protein kinase domain profile. 64 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1500 351 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Mal6g1500 351 PIRSF ILK 18 351 - -
Mal6g1500 351 CDD STKc_IRAK 70 346 - -
Mal6g1500 351 Gene3D Transferase(Phosphotransferase) domain 1 149 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1500 Mal-Chr6 27959240 27961783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1500 3 344 Glycoside Hydrolase AT3G07070 42.978 7.80e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal6g1500 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1500 - K00924 gmx:100305403 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1500 6 27959240 27961783 Mal6g1500 6 27959240 27961783 ECH
Mal6g1500 6 27959240 27961783 Mal5g3795 5 106517487 106520701 PCT