Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1495 ATGGCTGTTCAAGCTCAATACCCTTCCAATGTACTCTTTCTCAACACCAAAAACGGTCAAGAACAAGAATATTCATTGCAACCACCACAACCTGATCAATCCAATATAATGTTATTCAATACTACAGGTACTACTAATCCTCGAAAGAGAGGAAGAGAAACAGGGGTTATGCAACAATCTCAAAACATGATAAATCAATTCTCTTTACAATCTCACTCTCCTCATCTTATTGACCTCACTCAACTCCAAAATCATCATCAACAACAACAACAACAAAATCAAAACGTTGTTTCTACAGGCTTAGGTTTATCCTTTGGTGATCAACAACATCAAAGACTACATTTGCTACAACAACAACATGGGTCTCACTCCTCTCATTTCCTATCCCTATTGTCACATGGTTTAGCTTCACAAATCAAACAACAAAAAGATGAAATTGACCAATTCCTTCATGCCCAGGGAGAAGAGTTGCAACGGACAATAGAGGAAAAGAGACAGAGAAACTATCGAGCAATAATAAAGACAGCAGAGGAAACGGTGGCGCGTCGATTAAGAGAAAAGGAAATAGATTTACAAAACGCCACGCGCAGGAACGCGGAGTTAGAAGCACGCGCGGCGCATCTTAGAACAGAAGCGCAACTTTGGCAAGCAAAAGCGAAAGAACAAGAAGCAACAGCTATTTCTCTTCAAACACAGCTGCATCATGCTATGATGAACGGTGGCGCAGAAAACAGGGGTGAAAATGAATGTGGGCTATCGTGCGCCGTGGGTGTTGAGGGTCATGCTGAAGATGCGGAATCGGGTTATATTGACCCGGAAAGGGTTGTTGGATCGGGTCCTAAATGTAGAGGGTGTGAAAAACGGGTTGCTTCGGTTGTTGTGTTGCCGTGTCGACATTTGTGTGTTTGTACTGAATGTGACACACGCTTCCGTGTTTGCCCCGTTTGTTTCACCGTTAAAAATTCAACCGTTGAGATTTATTTATCTTAG 990 0.4222 MAVQAQYPSNVLFLNTKNGQEQEYSLQPPQPDQSNIMLFNTTGTTNPRKRGRETGVMQQSQNMINQFSLQSHSPHLIDLTQLQNHHQQQQQQNQNVVSTGLGLSFGDQQHQRLHLLQQQHGSHSSHFLSLLSHGLASQIKQQKDEIDQFLHAQGEELQRTIEEKRQRNYRAIIKTAEETVARRLREKEIDLQNATRRNAELEARAAHLRTEAQLWQAKAKEQEATAISLQTQLHHAMMNGGAENRGENECGLSCAVGVEGHAEDAESGYIDPERVVGSGPKCRGCEKRVASVVVLPCRHLCVCTECDTRFRVCPVCFTVKNSTVEIYLS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1495 329 Pfam Zinc finger, C3HC4 type (RING finger) 281 318 - -
Mal6g1495 329 Coils Coil 184 225 - -
Mal6g1495 329 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 328 - -
Mal6g1495 329 MobiDBLite consensus disorder prediction 20 53 - -
Mal6g1495 329 PIRSF SBP1_RNase_bind 1 329 IPR017066 -
Mal6g1495 329 ProSiteProfiles Zinc finger RING-type profile. 282 316 IPR001841 -
Mal6g1495 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 329 IPR013083 -
Mal6g1495 329 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 328 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1495 Mal-Chr6 27799891 27801176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1495 277 316 C3H Transcription Factor Family AT3G06140 43.182 1.04e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1495 6 27799891 27801176 Mal5g3791 5 106434870 106436222 PCT