Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1468 ATGGATAATAATTCAAATGAAGCATCATCATCATTGAGTTTTGTATCATCTCAATTATCAAATGGCTCAAGTAATAATCACAACATATCTTCCTCAACCAACAATGAACATGTGGCAAATACTGAAATTGTGAGTTTGAATAAGATCCATGGAAGCCTTGAGAAGTTATTGAGTGATGTTGATTATGATTATTGTGATGCTGAGATTCTTGTTGAAGAAATTCCTGTCGGTATACATCGATGTATATTGGCTTCGCGAAGTCAATTTTTTCATGAACTTTTTAAGAAAGGAAAAAATGGAGAAGTTAAGGAAGGAAAGGGAAAGCCAAGGTATTTCATGAAAGATTTGGTGCCATATGGTAGTGTTGGATATGAAGCTTTCATTGTTTTCTTGCACTATTTGTATACTGGAAAGTTAAAGGCCCCACCAACAGAAGTGACAACATGTGTTGATGAAGCATGTATTCATGATTCATGTCGCCCTGCTATCACTTCTCTGTTTCTTCCATTTTCGCTCCTTCTCTGTAATGCAGGAAGGCTATGTTTTCAACTTATTTGCAATTTCAGCAACCACTTCTAA 579 0.3558 MDNNSNEASSSLSFVSSQLSNGSSNNHNISSSTNNEHVANTEIVSLNKIHGSLEKLLSDVDYDYCDAEILVEEIPVGIHRCILASRSQFFHELFKKGKNGEVKEGKGKPRYFMKDLVPYGSVGYEAFIVFLHYLYTGKLKAPPTEVTTCVDEACIHDSCRPAITSLFLPFSLLLCNAGRLCFQLICNFSNHF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1468 192 ProSiteProfiles BTB domain profile. 65 143 IPR000210 GO:0005515
Mal6g1468 192 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 4 164 - -
Mal6g1468 192 SMART BTB_4 65 171 IPR000210 GO:0005515
Mal6g1468 192 SUPERFAMILY POZ domain 61 153 IPR011333 -
Mal6g1468 192 PANTHER REGULATORY PROTEIN NPR3 4 164 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mal6g1468 192 Gene3D Potassium Channel Kv1.1; Chain A 36 172 IPR011333 -
Mal6g1468 192 MobiDBLite consensus disorder prediction 1 33 - -
Mal6g1468 192 Pfam BTB/POZ domain 63 146 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1468 Mal-Chr6 27022011 27022589 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal6g1468 BTB 1.2e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1468 K14508 - gmx:100816582 215.312