Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1457 ATGGCTACAGATATTGGCCTTCTTTCCAATATGACTCAGATCCAAAAATCATCACAATCACAATCCCAACAACACCAACCAAACCCTAACTCCATTACTACTACACCCCCCTCACCATCATCATCATCTTGGATGTGGAACCCTAAGCAACACCAACAAGAGCAAGAAGAAGATGAAGATTCATGGGAGGTAAGAGCTTTTGCTGAAGACACAAGGAATATCTTGAACACAACATGGCCACCAAGGTCCTACACTTGTACCTTTTGTAGAAGAGAGTTCCGGTCAGCTCAAGCTTTAGGTGGTCACATGAATGTTCACCGCCGCGACCGAGCTCGTCTCCATCAAAATCAGCCACCATTAAATTCTTCTCATCCTTCATCACCATTCATAAATATCCCTCCTCAAGAGCTTGTTGCTAATGCTGGATTGTGTCTTCTTTACCATTTACCAAACCCTAATAATAATAATGCTATTGCTCCCTTCAATAGTTCTAATGGAGTTGAATCTCCTTCTACTTTTCTCTCAATCTCATCATCAACATCTTATCCACCAAATAATTTGATGATGCAAATGCAAATGCAAACTTGTTCTCCATCTTTTAATTTTCAAGTGGATAATTCAGCTAGGATGATCAACAATAACATTTCTTCTTTTTCTAGCAAAGTGGATCAACAACCTGCTATTTGCACCTCCTTTGATGATGATAATAGTCATGAAATTGAAGAGCTTGATCTTGAGCTCCGTTTAGGGAACAAGCCAACACCAACATGA 771 0.3995 MATDIGLLSNMTQIQKSSQSQSQQHQPNPNSITTTPPSPSSSSWMWNPKQHQQEQEEDEDSWEVRAFAEDTRNILNTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQNQPPLNSSHPSSPFINIPPQELVANAGLCLLYHLPNPNNNNAIAPFNSSNGVESPSTFLSISSSTSYPPNNLMMQMQMQTCSPSFNFQVDNSARMINNNISSFSSKVDQQPAICTSFDDDNSHEIEELDLELRLGNKPTPT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1457 256 Gene3D Classic Zinc Finger 76 128 - -
Mal6g1457 256 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mal6g1457 256 MobiDBLite consensus disorder prediction 1 62 - -
Mal6g1457 256 PANTHER ZINC FINGER C2H2-TYPE/INTEGRASE DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 45 251 - -
Mal6g1457 256 SMART c2h2final6 84 106 IPR013087 -
Mal6g1457 256 PANTHER OS07G0101800 PROTEIN 45 251 - -
Mal6g1457 256 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
Mal6g1457 256 Pfam C2H2-type zinc finger 84 108 - -
Mal6g1457 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Mal6g1457 256 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1457 Mal-Chr6 26667672 26668442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1457 41 253 C2H2 Transcription Factor Family AT4G17810 41.743 2.90e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal6g1457 zf-C2H2_6 5.5e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1457 6 26667672 26668442 Mal6g1457 6 26667672 26668442 ECH