Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1454 ATGGATTCGCGTGAACCACCACACTCTCCTCACCTTCTCCCTCACCAACTTGAACTGGAAAATATTGCACTAATTGGCCCTGATCCATTAACAAACACTTCCCCGACCACCACAATGGAACCAACCACTGCTCAATTCCCTCTATCCAACATCATTTCCAATTCATCCCCTCATTCTGAGCCTTTATCCTTGAAGCCATATGTGGGTGCTTCTTCCTCTGGATCTGGTTCGTTCAAGAGAAAGAGGGGAAGGCCTAGGAAGTATTTTCATGATGCTCCTTCTTCTTCCACGGGCAAGAGGAATACTAGTGGAAGAGGAAGGGGAAGGCCTCGTGGATCTTTTAAGAAGAAACAACTTATTGAAATGCCTGGAGTTACTAATGGATCTGGTTTCTCTCCACATGTGATCCTTGTGAACCATGGAGAGGATATCATTGCTAAAGTTGGGGCCTTTTGTCAGGGAGGACCTAATACAGATATGCTCATTCTTTCTGCTCATGGGTTGGTTAGCAGTGTCTCCCTTTATCAGTCAGGGACCATTGTTACTTATGAGGGTCGATTTGAAATTATCTCATTGTCGGGAAATTTGGAAGTATCTGACAACACCACCGGCTTCAAAAAGATGAGTTACTTCAAAGTGTCTCTCGAGAGTCCTGGTTCACGCCTTTTGGTAGGGGTAGTTGATAAGCTTATTGCAACATCTTTAGTAAAGGTCATAGTTGGGAGCTTTACTTTGGATTGCAAAAAGGCTAGCTCCAACAACCTGAAATCTGGGCATTCTTCAGTGTCGTTGCCCCAAATTGTTGCTTCTGGGACTCCAACCAGTGATGCATATCAAGGGCCTTCATCTGATTCCTCTGGTGACAATGACAATATTCCTTTGAATTAG 888 0.4437 MDSREPPHSPHLLPHQLELENIALIGPDPLTNTSPTTTMEPTTAQFPLSNIISNSSPHSEPLSLKPYVGASSSGSGSFKRKRGRPRKYFHDAPSSSTGKRNTSGRGRGRPRGSFKKKQLIEMPGVTNGSGFSPHVILVNHGEDIIAKVGAFCQGGPNTDMLILSAHGLVSSVSLYQSGTIVTYEGRFEIISLSGNLEVSDNTTGFKKMSYFKVSLESPGSRLLVGVVDKLIATSLVKVIVGSFTLDCKKASSNNLKSGHSSVSLPQIVASGTPTSDAYQGPSSDSSGDNDNIPLN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1454 295 MobiDBLite consensus disorder prediction 48 117 - -
Mal6g1454 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 244 IPR005175 -
Mal6g1454 295 MobiDBLite consensus disorder prediction 266 295 - -
Mal6g1454 295 Pfam AT hook motif 79 88 IPR017956 GO:0003677
Mal6g1454 295 Pfam AT hook motif 104 115 IPR017956 GO:0003677
Mal6g1454 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 33 291 - -
Mal6g1454 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 244 - -
Mal6g1454 295 SMART AT_hook_2 79 91 IPR017956 GO:0003677
Mal6g1454 295 SMART AT_hook_2 104 116 IPR017956 GO:0003677
Mal6g1454 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 291 IPR039605 GO:0003680
Mal6g1454 295 CDD DUF296 133 243 IPR005175 -
Mal6g1454 295 Gene3D - 133 258 - -
Mal6g1454 295 MobiDBLite consensus disorder prediction 48 78 - -
Mal6g1454 295 ProSiteProfiles PPC domain profile profile. 128 265 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1454 Mal-Chr6 26598114 26601287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1454 69 286 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 39.419 4.72e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1454 - - mtr:MTR_5g014360 342.043