Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1450 ATGGAAAATTTAAACACATCTTCAAACGCATCATCAACTAGCTGGTTATCTAATTTGCTATTGGAAGAAGTGGAAATGGATGGTTGTGATTTGTTTCAACAATGTGAACAAAACTTGTTTGGTCATGATGAAGAGTTTCTTTCACATGACATAGCAAGTGTTTTTCAACAAGAGGAAAATTTGCAACAACAACCTTTGTTATCTTCTGAAAGTTTTTCTTCTTATCCTTTAGAAACTAAATTTGAAAGACCCAACAAAAAATTGAAAAAAAACGCCACTTTGCAAGATGTTTCCCCTGTTTCTTCCCCTTCTTCTACAACTTCTCGGATTCTGTCTTTTGACCGTACCTTAAACACAAAAAAGAACGAGGTTATTCCATTGTCACAAACAAAACATCCTCAAAATCGAAAAGGGTCATTGCAAAAACAAAACATTGTTGAAACTACAAAGCCACAAGGACAAGGGACCAAGAGGTCTGTGGCTCACAATCAGGACCATATCATAGCTGAGAGAAAGAGAAGAGAGAAGCTCAGTCAATGCTTAATTGCTTTAGCTGCTCTTATTCCTGGATTGAAGAAGATGGACAAGGCTTCAGTCCTAGGAGATGCAATCAAGTATGTGAAAGAGCTTCAAGAACGTTTGAAGGTATTAGAGCAACAGAACAATAATAGTCCTGTTGAGTCTGTGGTGACAATTAACAAATCACAGTTAAGTTATGAGTCTTCAAGTGATGATGATTCTGAAGCTGCTAGTGGTAATAATGAAGCTGCTCTACCACATGTGGAAGCCAGAGTTTTGGACAAAGACGTACTCCTAAGAATCCATTGCCAAAAGCAAAAAGGACTTTTGCTAAATATATTGCTTGAGATTCAAAAGCTTAATCTCTTTGTTGTTAATAGCAGTGTCCTACCTTTTGGGGAATCTATCCTTGACATAACCATCGTTGCTCAGATGGGAACGGGGTACAACTTGACCAGAAATGATCTTGTGAAAAAACTACGTGTGGCTGCATTGAAAGCCATGTCGTAA 1029 0.3771 MENLNTSSNASSTSWLSNLLLEEVEMDGCDLFQQCEQNLFGHDEEFLSHDIASVFQQEENLQQQPLLSSESFSSYPLETKFERPNKKLKKNATLQDVSPVSSPSSTTSRILSFDRTLNTKKNEVIPLSQTKHPQNRKGSLQKQNIVETTKPQGQGTKRSVAHNQDHIIAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKELQERLKVLEQQNNNSPVESVVTINKSQLSYESSSDDDSEAASGNNEAALPHVEARVLDKDVLLRIHCQKQKGLLLNILLEIQKLNLFVVNSSVLPFGESILDITIVAQMGTGYNLTRNDLVKKLRVAALKAMS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1450 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 225 IPR036638 GO:0046983
Mal6g1450 342 Pfam Helix-loop-helix DNA-binding domain 165 211 IPR011598 GO:0046983
Mal6g1450 342 MobiDBLite consensus disorder prediction 91 109 - -
Mal6g1450 342 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 9 342 - -
Mal6g1450 342 MobiDBLite consensus disorder prediction 83 109 - -
Mal6g1450 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 210 IPR011598 GO:0046983
Mal6g1450 342 SMART finulus 167 216 IPR011598 GO:0046983
Mal6g1450 342 PANTHER BHLH TRANSCRIPTION FACTOR 9 342 - -
Mal6g1450 342 Gene3D - 154 224 IPR036638 GO:0046983
Mal6g1450 342 Coils Coil 200 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1450 Mal-Chr6 26489913 26492635 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1450 77 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.446 3.75e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g1450 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1450 - - mtr:MTR_5g014560 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1450 6 26489913 26492635 Mal6g1450 6 26489913 26492635 ECH