Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1448 ATGGAAAAATTAAACACATCTTCAAACGCATCATCATCAACTAGCTGGTTATCTAATTTGCTATTGGAAGAAATGGAAATAGAGGGTTGTGATTTGTTTCAACAATGCGAACAAAACTTTTTTGGTGATGAAGAGTTTCTTTCACATGACATAGCAAGTGTTTTTCAACAAGAGGAAAATTTGCAACAACAACCTTTGTTATCTTCTGAAAGCTATATTTTTTCTTATCCTTTAGAAATGAATTCGGAAAGACCCAACAAAAAATTGAAAACAAACAACACTTTGCAAGATGTTTCCCCTGTTTCCTCCCCTTCTTCTATCACTTCCAAGATTCTGTCTTTTGACCGTACCTTAAACACAACAAAGAACGAGGTTGTTCCACTGTCACAAACAAAACTACCTCAAAATCGAAAAGGGTCATTGCAAAAACAAAACATTGTTGAAACTACAATGCCACTAGGACAAGGGACTAAGAGGTCTGTGGCACATAATCAGGACCATATCATAGCTGAGAGAAAGAGAAGAGAGAAACTCAGTCAGTACTTAATTGCTCTAGCTGCTCTTATTCCTGGCTTGAAGAAGATGGACAAGGCTTCAGTCTTAGGAGATGCAATCAAGTATGTGAAAGAGCTTCAAGAACGTTTGAAGGTATTAGAGCAACAGAACAATAATAGTCCTGTTGAGTCTGTGGTGACAATTAACAAATCACAGTTAAGTTATGAGTCTTCAAGTGATGATGATGATTCTGAAGCTGCTAGTGGTAATAATGTAGCTGCTCTCCCACATGTGGAAGCCAGAGTTTTGGACAAAGACGTACTCCTAAGAATTCACTGCCAAAAGCAAAAGGGACTTTTGATCAATATATTGGTTGAGATTCAAAAGCTTAATCTCTTTGTTGTTAATAGCAGTGTCCTACCTTTTGGGGATTCTATCCTTGACATAACCATCGTTGCTCAGATGGGAAGACGAAAGTGA 975 0.3754 MEKLNTSSNASSSTSWLSNLLLEEMEIEGCDLFQQCEQNFFGDEEFLSHDIASVFQQEENLQQQPLLSSESYIFSYPLEMNSERPNKKLKTNNTLQDVSPVSSPSSITSKILSFDRTLNTTKNEVVPLSQTKLPQNRKGSLQKQNIVETTMPLGQGTKRSVAHNQDHIIAERKRREKLSQYLIALAALIPGLKKMDKASVLGDAIKYVKELQERLKVLEQQNNNSPVESVVTINKSQLSYESSSDDDDSEAASGNNVAALPHVEARVLDKDVLLRIHCQKQKGLLINILVEIQKLNLFVVNSSVLPFGDSILDITIVAQMGRRK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1448 324 Gene3D - 156 225 IPR036638 GO:0046983
Mal6g1448 324 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 8 322 - -
Mal6g1448 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Mal6g1448 324 Coils Coil 201 228 - -
Mal6g1448 324 Pfam Helix-loop-helix DNA-binding domain 166 212 IPR011598 GO:0046983
Mal6g1448 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 226 IPR036638 GO:0046983
Mal6g1448 324 SMART finulus 168 217 IPR011598 GO:0046983
Mal6g1448 324 PANTHER BHLH TRANSCRIPTION FACTOR 8 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1448 Mal-Chr6 26379197 26403070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1448 13 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.463 1.91e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g1448 HLH 6.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1448 - - mtr:MTR_5g014560 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1448 6 26379197 26403070 Mal5g3745 5 105554483 105558013 PCT