Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1446 ATGACATCAACTGATGAGTCATGGACAACTTGGTTATGTGATTTGGAACCAGAAGATTACAATTTCATCAATAGCAGCATAGCCCCTTTGCCACAAGAGAATAACAACTTGCAACAATCTTTATCTAATGGTAGCCATTGCTCTCACACAACCTCAAACACTATGAGCAATTCCTCAGGTGATGTTGACAGCTTTGAAAGGCCTACAAAGATACTCAAAACTAACCCTTTAAACATAGGGTACCCTTCTTCTCAAAAGAAAGATTCTTCTTCCCTTTCATATATTCTTTGCTTTAACAATGAGAAACCAGAACTAGAACCAATATTGAACATTGACTCAACCTTGAAACCAAAAGGTAAGATTTTGAATCATGGGAAATCTTTAACCTCAAAAGGGTCTTTACAAAATCCAAAAAAGGAACCAAAACACAATATTCCAGAGATCAAGAAGACTGATCCAGCTATCAGAAATGCTCAAGATCACATACTTGCTGAGAGAAAGAGAAGAGAAAAAATTAATCAAAAGTTCATAGCTCTTTCAGCACTCATTCCAGACTTGAAAAAGATGGATAAAGCTTCTGTATTAGGGGATGCTATAAACCATGTGAAACATCTTCAAGAACAAGTGAAGCTATTGGAAGAAAAGAACCAAAGGAAAAACATAGAATCTGTGGTGTATGTTGAGAAGACAAAGTCATGTTCTTCAGATGAAGATGTTTCAGATACCTCATCAAATTCTGGCTATGGTAATTGTTGTCACAACAACTCAAAAACTAATAGGTCATTGCCAGAAGTTGAGGCAAGAGTGTCAGAGAAAAACGTGCTGATTCGTGTCCATTGTGAGAAACATAAGAGTGTGTTGATGAAGATAATCCAAGAGATAGAGAATCTTCATCTATCGGTCACTAGTAGTAGTGCATTGTTATTTGGAATCACAAAACTTGACATAACCATCATAGCTGAGATGGATGAGGAGTTCAGCCTAAGCGTGCAGGAGCTAGCTAGAAAACTTCGAGTTGTACTCTTGTAA 1029 0.3703 MTSTDESWTTWLCDLEPEDYNFINSSIAPLPQENNNLQQSLSNGSHCSHTTSNTMSNSSGDVDSFERPTKILKTNPLNIGYPSSQKKDSSSLSYILCFNNEKPELEPILNIDSTLKPKGKILNHGKSLTSKGSLQNPKKEPKHNIPEIKKTDPAIRNAQDHILAERKRREKINQKFIALSALIPDLKKMDKASVLGDAINHVKHLQEQVKLLEEKNQRKNIESVVYVEKTKSCSSDEDVSDTSSNSGYGNCCHNNSKTNRSLPEVEARVSEKNVLIRVHCEKHKSVLMKIIQEIENLHLSVTSSSALLFGITKLDITIIAEMDEEFSLSVQELARKLRVVLL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1446 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 223 IPR036638 GO:0046983
Mal6g1446 342 Gene3D - 156 226 IPR036638 GO:0046983
Mal6g1446 342 Coils Coil 195 222 - -
Mal6g1446 342 MobiDBLite consensus disorder prediction 39 64 - -
Mal6g1446 342 MobiDBLite consensus disorder prediction 136 156 - -
Mal6g1446 342 SMART finulus 162 211 IPR011598 GO:0046983
Mal6g1446 342 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 3 342 - -
Mal6g1446 342 Pfam Helix-loop-helix DNA-binding domain 160 206 IPR011598 GO:0046983
Mal6g1446 342 Coils Coil 155 175 - -
Mal6g1446 342 MobiDBLite consensus disorder prediction 122 156 - -
Mal6g1446 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Mal6g1446 342 PANTHER BHLH TRANSCRIPTION FACTOR 3 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1446 Mal-Chr6 26358134 26360007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1446 131 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.794 4.91e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g1446 HLH 4.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1446 - - lang:109348843 331.257