Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1445 ATGATGGAAATTGTGTCTCCCATCTATGTGCCTGAATTTGGAATGGAGGATCTCAATTTCTTTAACCAATACCCGATGGATTCTCTTGCATCTCCATTTGATAACTTTGGCTTTCACTTTGACAACTACGAAACAATACCAAATTGTTTCCCAGTTGAAACTCCTAATGATCACTACGTTGCTCAAACCAAGAAGATCAAGACATCGATCATTAACCCTACTTCCTATTCATCACCTCAACTCATTTCTTTTGAGCACTGCAATGCAACACCAATTGCTTGTCATTCTAAGCAATTTCACAACCTTGATTATTCTGATGTAAAAGTCGAGAAAGGGTGTAATGAAAACAACAATTTTGCAGCAAATTATGACAACCAAGCGAATCAGACCAGAAACACAATTCAAGCTCGCGAACATGTAATGGCCGAAAGAAAACGAAGAGAAAAGCTCACTCGAAGTTTCATTGCTCTTTCAGCCATCGTTCCTGGCCTCAAGAAGATGGATAAAGCATCTGTGTTGGGAGATGCTATCAAGTATATGAAGCAACTACAAACACGTTTGCAAACACTAGAGAAACAAGCTGAAGACAACAAAAAAGATGGATCTGCAATCCAAGTGAAGAGATCTGTTATCTTCACTAATAATGATGATGATGATCACAACATCTCCAATAACCAGACACTTCCTGAAATTGAAGTAAGAGTTTCAAGCAAAGATGTACTCATCAAGATTCAATGTGACAAACACAGTGGACGTGCTGCTACGGTGCTTGGCCAATTAGAAAACCTTAATCTCACTGTCCAAAGTAGTACCTTTTTGCCCTTTGGAAACAACATTGTCGATGTAACCATTGTTGCTCAGATGAACAAGGAAAACTGTGTGACAGCAAAGGATCTCCTAAGAAGCATACGCCAGGCTTTAATAGTCCATATTTAA 936 0.3889 MMEIVSPIYVPEFGMEDLNFFNQYPMDSLASPFDNFGFHFDNYETIPNCFPVETPNDHYVAQTKKIKTSIINPTSYSSPQLISFEHCNATPIACHSKQFHNLDYSDVKVEKGCNENNNFAANYDNQANQTRNTIQAREHVMAERKRREKLTRSFIALSAIVPGLKKMDKASVLGDAIKYMKQLQTRLQTLEKQAEDNKKDGSAIQVKRSVIFTNNDDDDHNISNNQTLPEIEVRVSSKDVLIKIQCDKHSGRAATVLGQLENLNLTVQSSTFLPFGNNIVDVTIVAQMNKENCVTAKDLLRSIRQALIVHI* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1445 311 Coils Coil 173 200 - -
Mal6g1445 311 CDD bHLH_AtNAI1_like 136 208 - -
Mal6g1445 311 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 1 310 - -
Mal6g1445 311 PANTHER BHLH TRANSCRIPTION FACTOR 1 310 - -
Mal6g1445 311 Gene3D - 124 200 IPR036638 GO:0046983
Mal6g1445 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Mal6g1445 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 196 IPR036638 GO:0046983
Mal6g1445 311 Pfam Helix-loop-helix DNA-binding domain 137 184 IPR011598 GO:0046983
Mal6g1445 311 SMART finulus 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1445 Mal-Chr6 26321444 26323539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1445 130 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.405 8.32e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal6g1445 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1445 - - cam:101507557 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1445 6 26321444 26323539 Mal6g1445 6 26321444 26323539 ECH
Mal6g1445 6 26321444 26323539 Mal5g3743 5 105520501 105522001 PCT