Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1443 ATGCGTTTCCTTCTTCTCCTTTTCTTTCTCTCCCATTTCCATTTCCACCACCATGTTTTCTCTGCTCCAATCTCAGAATACCGTGCTTTACTCTCTCTCCGTTCAACAATTACCGATTCTACCCCTCCCACACTCTCTTCATGGAACACCAACACCACACACTGCACATGGTTCGGCGTAACATGCAACACGCGCCGCCACGTCACCGCCCTTAACCTCACCGGACTTCAACTCTCCGGCACACTCTCCGACGAACTCTCTCACCTTCCATTTCTCACCAACCTCTCCCTCGCCGATAATAAATTCACCGGCGAAATCCCGCCGTCGCTCTCCGCCGTCACTGGTCTCCGGCATCTTAACCTCTCCAACAATGTCTTCAACGGAACTTTCCCTTCTGAACTCTCTCTTCTCAAAAACCTTGAAGTTCTTGACCTCTACAACAACAACATGACCGGAACTCTTCCCCTCGCCGTGACGGAGTTGCCAAATCTCCGTCATTTGCATCTCGGAGGTAACTACTTCACCGGCCAGATCCCGCCGGAGTACGGTTCATGGCAACATTTAGAATACCTTGCAGTTTCCGGTAACGAACTCGACGGAACTATTCCACCGGATATCGGAAATTTGACTAGTCTCCGGGAGCTTTACATCGGATACTTCAACACATACACCGGCGGCATTCCGCCGCATATCGGAAACTTAACAGAACTCATCCGTCTCGACGCCGCGTACTGTGGTTTATCCGGCGAGATACCACATGAAATCGGTAAACTTCAGAACCTAGATACACTCTTTCTTCAAGTGAATGCACTTTCAGGCTCTTTAACATGGGAGCTTGGAAATTTGAAGAGCTTAAAATCAATGGATTTGTCTAATAACATTTTAACCGGTGAGATTCCGACGAGTTTCGGTGAATTGAAGAATTTAACACTTTTGAATCTGTTCAGAAACAAGCTTCACGGTGCTATACCGGAGTTTATCGGTGATATGCCGGCGTTGGAGGTTATTCAGTTATGGGAGAATAACTTCACCGGTAATATTCCGATGAGTTTAGGAACAAATGGAAAATTGAATCTTTTAGACATTTCATCGAACAAGTTAACTGGAACACTTCCACCTTATTTGTGTTCTGGGAATAAGCTTCAAACTTTGATAACTCTTGGGAATTTTTTGTTTGGTCCTATTCCTGAATCTCTTGGTAGTTGTGAATCATTGAATCGGATTCGAATGGGTGATAATTTTTTGAATGGTTCAATTCCTAAGGGTTTGTTTGGATTACCAAAATTGACTCAGGTTGAGCTTCAAGATAATTATTTATCTGGAAATTTTCCTGAGACTCATTCTGTTTCTGCTGATCTTGGTCAGATTACTTTGTCGAATAATAAACTTTCAGGTCCTTTGCCACCTTCAATTGGGAATTTTTCCAGCATGCAGAAGCTTCTGCTTGATGGTAACATGTTTGAGGGTAAGATTCCATCTCAGATTGGAAGGTTGCAACAGCTTTCAAAGATTGATTTTAGTCATAACAGGTTTTCGGGTCCGATTGCACCTGAGATTAGTAAATGCAAGCTGTTAACTTTTGTTGATCTTAGTCGAAATGAGTTGTCTGGGGTCATCCCTAATGAGATTACTCATATGAAGATATTGAATTACTTGAATGTCTCTAGAAATCATTTGGTTGGTAGTATTCCTGGTTCTATAGCGTCGATGCAGAGTTTAACTTCTGTTGATTTTTCGTATAATAATCTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGTTACTTTAACTACACGTCTTTCTTGGGAAACCCTGATCTTTGTGGACCTTATTTGGGTGCTTGTAAAGATGGTGTTGTTAATGGTGCTAATCAACCTCATCATGTTAAGGGTCATCTTTCTTCGACCGTGAAGCTGTTGCTTGTTATTGGGTTGCTTGCATGTTCCATTGTATTTGCTATTGCAGCGATATTCAAGGCTCGGTCGTTGAAGAAGGCTAGCGAGGCCCGTGCGTGGAAATTGACTTCGTTTCAACGATTGGAATTCACTGCTGATGATGTTTTGGATTCCCTGAAAGAGGATAACATCATAGGGAAAGGTGGTGCTGGCATTGTCTACAAAGGAGCAATGCCGAATGGGGAACTTGTTGCTGTGAAAAGGCTTCCGGTTATGAGCAGAGGCTCTTCTCATGATCATGGATTCAATGCTGAGATTCAGACGTTGGGGAGAATTCGACACAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAGACAAATCTTTTGGTTTACGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGAAAGAAAGGTGGTCATTTGTATTGGGATACAAGGTATAAGATTGCTGTGGAGGCTGCAAAGGGACTTTGCTATTTACACCATGATTGTTCCCCGCTTATTGTTCATCGAGATGTGAAATCAAACAACATCCTTCTTGATTCTAATTATGAAGCTCATGTTGCTGATTTTGGGTTAGCCAAGTTCTTGCAAGATTCTGGAACATCCGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTACGCGTATACATTGAAAGTTGATGAGAAAAGCGATGTGTACAGCTTCGGTGTTGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCAGTAGGAGAATTTGGCGACGGTGTGGACATTGTGCAATGGGTGAGAAAAATGACAGACTCCAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCAAGACTTTCAGCAGTTCCACTTCACGAGGTCATGCATGTTTTCTATGTCGCCATTCTATGTGTTGAAGAACAGGCAGTAGAAAGGCCAACTATGCGCGAAGTTGTTCAAATTCTGACCGAGCTTCCAAAGTCACCCGAGTCTAAACTAGGAGACTCAACATTTACAGAATCCTCTTTGTCATCATCAAATGCTTTAGAATCTCCAACTGCAGCCTCTAAGGATCACCAACATCCTCCTCAATCTCCACCGCCGGATCTCCTAAGCATTTAA 3042 0.4297 MRFLLLLFFLSHFHFHHHVFSAPISEYRALLSLRSTITDSTPPTLSSWNTNTTHCTWFGVTCNTRRHVTALNLTGLQLSGTLSDELSHLPFLTNLSLADNKFTGEIPPSLSAVTGLRHLNLSNNVFNGTFPSELSLLKNLEVLDLYNNNMTGTLPLAVTELPNLRHLHLGGNYFTGQIPPEYGSWQHLEYLAVSGNELDGTIPPDIGNLTSLRELYIGYFNTYTGGIPPHIGNLTELIRLDAAYCGLSGEIPHEIGKLQNLDTLFLQVNALSGSLTWELGNLKSLKSMDLSNNILTGEIPTSFGELKNLTLLNLFRNKLHGAIPEFIGDMPALEVIQLWENNFTGNIPMSLGTNGKLNLLDISSNKLTGTLPPYLCSGNKLQTLITLGNFLFGPIPESLGSCESLNRIRMGDNFLNGSIPKGLFGLPKLTQVELQDNYLSGNFPETHSVSADLGQITLSNNKLSGPLPPSIGNFSSMQKLLLDGNMFEGKIPSQIGRLQQLSKIDFSHNRFSGPIAPEISKCKLLTFVDLSRNELSGVIPNEITHMKILNYLNVSRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVVNGANQPHHVKGHLSSTVKLLLVIGLLACSIVFAIAAIFKARSLKKASEARAWKLTSFQRLEFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLYWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSAVPLHEVMHVFYVAILCVEEQAVERPTMREVVQILTELPKSPESKLGDSTFTESSLSSSNALESPTAASKDHQHPPQSPPPDLLSI* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1443 1013 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Mal6g1443 1013 Gene3D Transferase(Phosphotransferase) domain 1 769 983 - -
Mal6g1443 1013 Gene3D Ribonuclease Inhibitor 276 357 IPR032675 -
Mal6g1443 1013 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Mal6g1443 1013 Gene3D Phosphorylase Kinase; domain 1 657 768 - -
Mal6g1443 1013 SUPERFAMILY Protein kinase-like (PK-like) 686 962 IPR011009 -
Mal6g1443 1013 SUPERFAMILY L domain-like 357 612 - -
Mal6g1443 1013 SUPERFAMILY RNI-like 71 392 - -
Mal6g1443 1013 Pfam Leucine Rich repeats (2 copies) 138 178 IPR025875 -
Mal6g1443 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 1003 - -
Mal6g1443 1013 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1003 - -
Mal6g1443 1013 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Mal6g1443 1013 SMART LRR_typ_2 161 185 IPR003591 -
Mal6g1443 1013 SMART LRR_typ_2 570 593 IPR003591 -
Mal6g1443 1013 SMART LRR_typ_2 306 330 IPR003591 -
Mal6g1443 1013 SMART LRR_typ_2 89 113 IPR003591 -
Mal6g1443 1013 SMART LRR_typ_2 137 160 IPR003591 -
Mal6g1443 1013 MobiDBLite consensus disorder prediction 968 1013 - -
Mal6g1443 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Mal6g1443 1013 Gene3D Ribonuclease Inhibitor 358 618 IPR032675 -
Mal6g1443 1013 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1443 1013 Gene3D Ribonuclease Inhibitor 180 275 IPR032675 -
Mal6g1443 1013 Pfam Protein kinase domain 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1443 1013 SMART serkin_6 691 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1443 1013 MobiDBLite consensus disorder prediction 970 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1443 Mal-Chr6 26217839 26221338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1443 18 992 Receptor kinase-like Gene Family AT5G65700 80.020 0.0 1591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal6g1443 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1443 - - ccaj:109800149 1726.06