LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g1440	ATGAAAAAACTCTTTCTCATTCTTCTCTTTTCATTACTATGTTCAAATGGAACCACTTTTTCACTCTCAAGAGACTATGAAATTCTACTTCATGTGAAGAACACACAAATTGATGACAAAAACAATAGTCTCAATAATTGGCTTCCAAACACAGAACACAATCCTTGTAACTGGACAGGCATAACCTGCGATTCGCGAAACAAATCCATTGTATCAATCGACCTCACAGAAATCGGCATCTACGGCGAATTTCCCTCTAATTTCTGTCGCATTCCAACACTCCAAAGCCTTTCACTTGGTGGCAACTTTCTAGGCAATACTATTACCTCACATTCCATGTTACCATGCTCAAAACTTCGTTTCTTGAACATCTCCGACAATTTATTCGTCGGAGCCTTACCGGAATTCAACTCAGAAATCTTTGAACTAAGAGTACTCGACGCCACAACCAACAACTTCTCCGGTGACATTCCAGCGAGTTTAGGCCAGTTTCCACAACTGAAGGTCCTCAATTTATCCGGAAACCTTTTCACCGGAACAATTCCGCCATTTTTAGGTAATCTCAGTGAATTAACTCATTTTGAATTTGCTTATACAGAAACAATGAAACCAAGTCCTTTACCTTCTGAACTAGGTAACCTCACTAAGCTAGAATTTCTCTACCTTGCCGGAATAAACCTCATAGGTAACATACCAGAAACTATTGGCAACCTTGTTTCCATCAAAAACTTTGATTTGTCAGATAATTTCTTGTCTGGTAAAATCCCAGAAACCATTTCTGGTATGAAAAATTTGGAACGAATTGAACTATTTGATAACAATCTTTCTGGTGAAATTCCACAAGGTTTAACAAACCTTACAAATTTGTTTCTATTAGACCTCTCTCAGAACGCTCTCACCGGAAAATTGTCTGAAGAAATTGCTTCAATGAATGTTTCTATACTCCACTTGAATGACAATTTTCTCAGTGGTGAAGTTCCAGAAATTTTAGCTTCAAATCCAAACTTGAAGGAACTGAAGCTTTTCAATAATAGCTTTTCTGGGAAACTTCCAAAAGAGCTTGGAAAAAACTCTGCTATAGAAGAAATTGATGTTTCAACCAATAACTTCATTGGAGAGTTACCAAAGTTTCTCTGTCAAAAGAAAAAATTTCAAAGACTCGTCACATTCAAAAATCGATTTTCTGGGTCTCTGCCTAATGAGTATGGAGAATGTGATTCTCTTAATTATGTAAGAATCGAAAACAATGAATTCTCCGGTTCAGTTCCAGCAAGATTTTGGAACCTTTCAAAGCTTAATACACTGATAATGGATCACAACAAGTTTGAAGGTTCTGTTTCAAGTTCAATCTCAAGAGCAAAGCGAATCACGAAACTGGTTTTAGCCGGTAACAGGTTTTCCGGTGAGTTTCCGGTAGGTGTCTGCAAGCTTGTTAAGCTTGTGGTAATCGATATTGGAAGCAACCGATTCACCGGTGAAGTTCCCTCCTGCATAACTGGTTTGAAAAATTTGCAGAAGCTTAAAATGCAAGAAAACATGTTCACCGGAAAAATTCCCGGTAATGTTACTTCATGGACTGAATTAACGGAGTTAAACTTGTCGCATAACCGGTTAACAGGTTCAATTCCACCGGAACTTGGTAAATTACCTGATTTAATTTACCTTGATCTCTCCGTTAATTCTTTAACGGGGAAGATTCCGGTGGAGTTAACAAACTTAAAGTTGAACATGTTCAACGTTTGTGATAACAAATTATCCGGTGAGGTACCGTCTGGTTTTAACCGCGAAGTTTATTTGTCGGGTCTAATGGGTAACCCGGGTTTATGCAGCAATGTTATGAAAACCTTAACTCCTTGTTCAAAACACAGACCATTTTCTGTTGTTGCTATAATCGTTTTAGTTCTTTTGGTTGTGTTGATTTTGGTGTCTCTTTTGTGGTTCTTGAAGAAAAAGTCAAAATCTTTTGTTGGAAAATCCAAACGGGCTTTTACAACAACAGCTTTTCAGAGAGTAGGGTTCAATGAGGAAGATATAGTACCTTTTTTAACCAATGAGAATTTGATTGGAAGAGGTGGGTCGGGTCAGGTGTATAAAGTGAAGGTGAAAACGGGTCAAATAGTTGCAGTGAAAAAGCTTTGGGGTGGAAATGAAGCACAAAAACCTGATACAGAATCAGTGTTTAAGTCAGAGATTGAAACATTAGGTAGAATTAGACATGCTAATATAGTGAAACTTTTGTTTTGTTGTAGTTGTGATGATTTCAGAATATTGGTTTATGAGTATATGGAAAATGGGAGTTTAGGTGATGTTTTGCATGAAGGGAAGTTTGTGGAGTTTTTGGATTGGTCTAAGAGATTTGGAATTGCTTTAGGTGCTGCTCAAGGGTTGGCTTATTTACATCATGATTGTGTTCCTGCTATTGTTCATAGGGATGTGAAGAGTAATAACATATTGCTTGATCATGATTTTGTTCCTCGTGTTGCTGATTTTGGACTTGCTAAGACATTGCAGCATGAAGGAAGTGAAGGTGCTATGTCTAGAGTTGCTGGATCATATGGTTACATTGCTCCTGAGTATGGTTATACGCTGAAAGTGACTGAGAAGAGTGATGTGTATAGTTTTGGAGTGGTGTTGATGGAATTGATCACTGGAAAGAGGCCAAATGACTCTTGTTTTGGTGAGAACAAAGATATTGTGAAGTGGGTCACTGAAATTGCTTTATCAACATCTCATGAAGGAGGAGGAAGTGGCAACATTGGAGGAGGCTATGATTGTATTGTGACACAAATTGTGGACCCAAGATTGAACTTAGACACTTGTGATTATGAAGAGGTTGAGAAGGTTTTAAATGTGGCTCTACTTTGTACCTCAGCATTTCCAATTAGTAGGCCCTCAATGAGAAAAGTGGTTGAATTGGTCAAGGACCAGAAACTGGCTCGCCCCAAGTCATGA	2952	0.3814	MKKLFLILLFSLLCSNGTTFSLSRDYEILLHVKNTQIDDKNNSLNNWLPNTEHNPCNWTGITCDSRNKSIVSIDLTEIGIYGEFPSNFCRIPTLQSLSLGGNFLGNTITSHSMLPCSKLRFLNISDNLFVGALPEFNSEIFELRVLDATTNNFSGDIPASLGQFPQLKVLNLSGNLFTGTIPPFLGNLSELTHFEFAYTETMKPSPLPSELGNLTKLEFLYLAGINLIGNIPETIGNLVSIKNFDLSDNFLSGKIPETISGMKNLERIELFDNNLSGEIPQGLTNLTNLFLLDLSQNALTGKLSEEIASMNVSILHLNDNFLSGEVPEILASNPNLKELKLFNNSFSGKLPKELGKNSAIEEIDVSTNNFIGELPKFLCQKKKFQRLVTFKNRFSGSLPNEYGECDSLNYVRIENNEFSGSVPARFWNLSKLNTLIMDHNKFEGSVSSSISRAKRITKLVLAGNRFSGEFPVGVCKLVKLVVIDIGSNRFTGEVPSCITGLKNLQKLKMQENMFTGKIPGNVTSWTELTELNLSHNRLTGSIPPELGKLPDLIYLDLSVNSLTGKIPVELTNLKLNMFNVCDNKLSGEVPSGFNREVYLSGLMGNPGLCSNVMKTLTPCSKHRPFSVVAIIVLVLLVVLILVSLLWFLKKKSKSFVGKSKRAFTTTAFQRVGFNEEDIVPFLTNENLIGRGGSGQVYKVKVKTGQIVAVKKLWGGNEAQKPDTESVFKSEIETLGRIRHANIVKLLFCCSCDDFRILVYEYMENGSLGDVLHEGKFVEFLDWSKRFGIALGAAQGLAYLHHDCVPAIVHRDVKSNNILLDHDFVPRVADFGLAKTLQHEGSEGAMSRVAGSYGYIAPEYGYTLKVTEKSDVYSFGVVLMELITGKRPNDSCFGENKDIVKWVTEIALSTSHEGGGSGNIGGGYDCIVTQIVDPRLNLDTCDYEEVEKVLNVALLCTSAFPISRPSMRKVVELVKDQKLARPKS*	984

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal6g1440	983	SMART	serkin_6	682	979	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1440	983	SUPERFAMILY	Protein kinase-like (PK-like)	682	972	IPR011009	-
	Mal6g1440	983	Gene3D	Transferase(Phosphotransferase) domain 1	762	981	-	-
	Mal6g1440	983	Pfam	Protein kinase domain	684	889	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1440	983	ProSiteProfiles	Protein kinase domain profile.	682	978	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal6g1440	983	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	807	819	IPR008271	GO:0004672\|GO:0006468
	Mal6g1440	983	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2	10	978	-	-
	Mal6g1440	983	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	10	978	-	-
	Mal6g1440	983	Pfam	Leucine Rich Repeat	166	188	IPR001611	GO:0005515
	Mal6g1440	983	SUPERFAMILY	RNI-like	66	381	-	-
	Mal6g1440	983	ProSiteProfiles	Leucine-rich repeat profile.	527	550	IPR001611	GO:0005515
	Mal6g1440	983	Pfam	Leucine rich repeat N-terminal domain	24	64	IPR013210	-
	Mal6g1440	983	SUPERFAMILY	L domain-like	311	590	-	-
	Mal6g1440	983	ProSitePatterns	Protein kinases ATP-binding region signature.	688	711	IPR017441	GO:0005524
	Mal6g1440	983	Gene3D	Ribonuclease Inhibitor	311	621	IPR032675	-
	Mal6g1440	983	Pfam	Leucine Rich repeats (2 copies)	526	565	IPR025875	-
	Mal6g1440	983	Gene3D	Phosphorylase Kinase; domain 1	666	761	-	-
	Mal6g1440	983	Gene3D	Ribonuclease Inhibitor	22	310	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal6g1440	Mal-Chr6	26151534	26154839	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal6g1440	25	977	Receptor kinase-like Gene Family	AT5G65710	54.705	0.0	1036

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Mal6g1440		Pkinase	6.7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g1440	-		-	mtr:MTR_5g014720	1704.88