Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1435 ATGGGTCTTAATAATCAAGATTCCAATAACTCACACCTTCACCTTGTTCTAGGCTTATCTTTAAGCACTTCTACTAGTACTATCCCAAAGGAAATAACCACCAACAAAGAAAACTCATCAAATCCCTATTCCTCCAAAGAGCCATCCTTAACGTTGGGACTCTCAAATTACAAACAAGCTCTCAAAACTTATGGTGAGGAGCTTTGTAGACAAACTTCTTCACCTTACAGCGTTGTTAATTCTTCTTTCTCAAACGGGAGAGTGCTGCAGGTGAAGAGAGAAAGAGATGAAGAAGAAGACGTAGAAGAAGAAAGGGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGGTACAAATGCTAGAAAGAAACTTAGGCTTACCAAAGAACAATCTCTACTTCTGGAAGAAAGCTTCAAATTACACAGCACTCTCAATCCAAAACAAAAACAAGCTTTAGCAAGACAGTTGAATCTTAGGCCACGACAAGTTGAAGTATGGTTCCAGAATCGGAGAGCCAGAACAAAGCTGAAACAAACAGAGGTGGATTGCGAATTCTTGAAGAAATGTTGTGAAACATTAACAGACGAAAATAGGAGGCTAAAAAAGGAGTTGCAAGAGCTGAAGTCATTGAAAGTAGCACAACCTTTGTACATGCCTATGCCTGCAGCTACCCTCTCCATCTGCCCCTCTTGCGAGAGGCTCGGCCGCGTCGCGGACGGAGGTGGTGGTTCCAATAAGATCACTGCCTTCACCATGGCTCCAAATACTCATTTCTACAATCATTTCAACAATCCTTCGGCAGCATGTTAA 810 0.416 MGLNNQDSNNSHLHLVLGLSLSTSTSTIPKEITTNKENSSNPYSSKEPSLTLGLSNYKQALKTYGEELCRQTSSPYSVVNSSFSNGRVLQVKRERDEEEDVEEERVSSRVSDEDEDGTNARKKLRLTKEQSLLLEESFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKSLKVAQPLYMPMPAATLSICPSCERLGRVADGGGGSNKITAFTMAPNTHFYNHFNNPSAAC* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1435 269 SMART halz 177 220 IPR003106 GO:0006355|GO:0043565
Mal6g1435 269 Pfam Homeobox associated leucine zipper 177 210 IPR003106 GO:0006355|GO:0043565
Mal6g1435 269 ProSitePatterns 'Homeobox' domain signature. 152 175 IPR017970 GO:0000981|GO:0006355
Mal6g1435 269 Coils Coil 183 213 - -
Mal6g1435 269 CDD homeodomain 121 178 IPR001356 GO:0003677
Mal6g1435 269 Gene3D - 114 182 - -
Mal6g1435 269 MobiDBLite consensus disorder prediction 90 121 - -
Mal6g1435 269 SUPERFAMILY Homeodomain-like 112 178 IPR009057 -
Mal6g1435 269 Pfam Homeodomain 121 175 IPR001356 GO:0003677
Mal6g1435 269 SMART HOX_1 119 181 IPR001356 GO:0003677
Mal6g1435 269 ProSiteProfiles 'Homeobox' domain profile. 117 177 IPR001356 GO:0003677
Mal6g1435 269 PANTHER - 13 269 - -
Mal6g1435 269 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 13 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1435 Mal-Chr6 26015022 26016701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1435 1 269 Homeobox Transcription Factor Family AT4G37790 59.233 2.93e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g1435 Homeodomain 6.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1435 K09338 - gmx:100795135 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1435 6 26015022 26016701 Mal5g3727 5 105251149 105252600 PCT