Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1433 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAAAAAGGTCCATGGTCACCTGAAGAAGATACCAAACTCAAGTCTTACATAGAACAGAATGGTACTGGTGGAAATTGGATTGCTCTCCCTCAGAAGATAGGACTTAAGAGATGTGGAAAAAGTTGTCGTCTTAGATGGTTAAATTATCTTCGACCAAATATTAAACATGGTGGTTTCTCAGAGGAAGAAGATGAAATTATTTGCAGCCTCTATGTTAGTATTGGAAGCAGGTGGTCTATCATAGCAGCACAATTACCGGGACGAACAGATAATGACATAAAGAACTACTGGAACACAAGGTTGAAGAAGAAGCTTCTTGGAAAACAAAGGAAGGAGCAACAAGCTCAAGCACAAGCTCGTCGAGTTAGCAGCATGAAACAAGAGATGAAAAGAGAAACAAATCAGAATTTGATGGTGGCGGCTTCGGGTGTCAATAATATGAGTCCAGATCTTTATTGGCCTGGAGAGTATTCTGTTCATCCTATGCCAGTTTCAAATTCATCCATAATTGATTATGATATGAACAATCAAACATCCTTCACAAGCTTAATGAACATTCCAAACCCTTTGTCCATGGTGAGTAATACAATTACAAACAACGGTGGAAATTGCCAACCATCACAAATATTTCAAGGGTTTGAAAATTTTCCAAGGGATTTAAGTGAGCTTTTATGTGTGAACCAACAACAAATAATGGATAGAACAATTGATGGTTTTTATGGAATGGAATCTATGGACATGAGCAATGGTGGTAGCACAATCACAACAACTTCAACAGAAAGCACTAGTTGGGGAGATATGAACTCTTTGGTTTACTCACCTTTGGTTTCTGACTATGAAGGTTGTTGCCAACAAGGATCAATTCCACAAGATGTTGTTGCTTTTGATGAGTCTAGGTATTTTGGAATGCAAATGCAATAA 957 0.3845 MGRAPCCDKANVKKGPWSPEEDTKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDEIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQAQARRVSSMKQEMKRETNQNLMVAASGVNNMSPDLYWPGEYSVHPMPVSNSSIIDYDMNNQTSFTSLMNIPNPLSMVSNTITNNGGNCQPSQIFQGFENFPRDLSELLCVNQQQIMDRTIDGFYGMESMDMSNGGSTITTTSTESTSWGDMNSLVYSPLVSDYEGCCQQGSIPQDVVAFDESRYFGMQMQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1433 318 CDD SANT 71 113 IPR001005 -
Mal6g1433 318 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal6g1433 318 MobiDBLite consensus disorder prediction 119 139 - -
Mal6g1433 318 SMART sant 13 64 IPR001005 -
Mal6g1433 318 SMART sant 67 115 IPR001005 -
Mal6g1433 318 Gene3D - 7 68 - -
Mal6g1433 318 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mal6g1433 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal6g1433 318 CDD SANT 16 62 IPR001005 -
Mal6g1433 318 Gene3D - 70 147 - -
Mal6g1433 318 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mal6g1433 318 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mal6g1433 318 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mal6g1433 318 MobiDBLite consensus disorder prediction 123 139 - -
Mal6g1433 318 PANTHER OS09G0431300 PROTEIN 208 299 - -
Mal6g1433 318 PANTHER OS09G0431300 PROTEIN 1 194 - -
Mal6g1433 318 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 1 194 - -
Mal6g1433 318 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 208 299 - -
Mal6g1433 318 Coils Coil 120 147 - -
Mal6g1433 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1433 Mal-Chr6 25956726 25958195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1433 1 285 MYB Transcription Factor Family AT3G49690 48.254 1.68e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g1433 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1433 K09422 - gmx:100812816 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1433 6 25956726 25958195 Mal5g3724 5 105191349 105192473 PCT