Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1428 ATGAAGTCCATAGAAAATATTGATGATACCATTAACATAAACAATCAAAATAGTAACATGTTTGGTTTCTCTTTCTCTCCACAAATGAATATAGGTGTTCCTTCCTCTTCTACTTCTACTATTCCAACAAGCTTTTATTATCACCCTACACCTCTTCATAACTATGGCTATTACTATGGACATGAGAATGAACATGTTGGATTGTATTCAGCCTTGCCCATCATGCATGATGGATCACAAGCACAAGCAATGGGAATCTCTCATTATGGAGGCAGTACCAAAGAAGAAATGCAACTAAACATAGGTAGTATTTTTAACAACCAAACTTCATGCCATAGTAAACTAAACAATCCAAATAACCAAAATCAAGTACAAGAGAATACGAGTTTGTTGGGGAGTCTGGCGGAGCATCAGGAGCAACAACTCTCATATTACACCGCCTTAAGAAACCATAATTCGATGTTAGATGGACCAACAAAATATCAGCTAGAAGATAGTGTCCAACTACCAAATATAGTTGAGGATGAAATTTCTGACCTTAGGAGATGGGTGTCAAGGGACTTCCATGCTGCTAGCCATGCACAAGAGTCAAAGACATGTGTGTTTTCCGTGAGACCTAGTGTCACAAGTTCACCACAAACATCACCAATTGATTCTGTTTCCGTTGATACGATCAAAAGGAAAGTGGAGGACTTGGAAAAGAATCAGAATAAAACTGTTTGTAGAAAATCCATTGGTTCCCTTGGACAAAGAACATCTCAATATAGAGGTGTAACAAGACATAGGTGGACAGGTAGATATGAAGCTCATCTATGGGATAACAGCTGCAAAAAAGAGGGCCAAGCTAGGAAAGGAAAGCAAGTTTATCTAGGAGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATATGGCTGCACTCAAGTATTGGGGTCCCTCCACTCGTATAAATTTCCCATTAGAAAATTATGAAAAGGAACTTGAGGAAATGAAGAAAATGACTAGACAAGAATACATTGCTCATTTAAGAAGGAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATCTATAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAAGCTCGAATAGGGAGAGTGGCTGGAAATAAAGATCTATATCTTGGAACATTCACTACACAAGAAGAAGCAGGTGAAGCATATGACATAGCTGCTATAAAATTCAGAGGAGCAAATGCTGTTACTAATTTTGATATAACAAGATATGATGTTGAAAAAATTATATCCAGTAGTAACCTTCTTAGCAGTGAAGAAGCTAGAAGAAACAGAAAAATGGATGATGTAATTATCAATAATACGTTTGAAGAAATTCAAGAAGCTATTAATCCAATACAGAAGAGATGCAAAATCCAACCATTCTCAATAGATAATATATATGATCAAGAAGTAGAGGAATCAAATAGAGTGCATTTGTCAAATCCATCTTCAATTGTGACAAGTTTGAGCAGTTCAAGAGAAGAAAGCCCTGAAAACAGGACAAGCTTACCAATGCTCTTTGGAATGACTTCAACAACATCATTAATGTCTTCATTTTCTTTGCCTCAGATTCCACTGTCTGTTTTTGCTGCATGGACCGATGCATAA 1632 0.3725 MKSIENIDDTININNQNSNMFGFSFSPQMNIGVPSSSTSTIPTSFYYHPTPLHNYGYYYGHENEHVGLYSALPIMHDGSQAQAMGISHYGGSTKEEMQLNIGSIFNNQTSCHSKLNNPNNQNQVQENTSLLGSLAEHQEQQLSYYTALRNHNSMLDGPTKYQLEDSVQLPNIVEDEISDLRRWVSRDFHAASHAQESKTCVFSVRPSVTSSPQTSPIDSVSVDTIKRKVEDLEKNQNKTVCRKSIGSLGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQARKGKQVYLGGYDMEEKAARAYDMAALKYWGPSTRINFPLENYEKELEEMKKMTRQEYIAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFTTQEEAGEAYDIAAIKFRGANAVTNFDITRYDVEKIISSSNLLSSEEARRNRKMDDVIINNTFEEIQEAINPIQKRCKIQPFSIDNIYDQEVEESNRVHLSNPSSIVTSLSSSREESPENRTSLPMLFGMTSTTSLMSSFSLPQIPLSVFAAWTDA* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1428 543 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT ISOFORM X1 18 541 - -
Mal6g1428 543 SUPERFAMILY DNA-binding domain 253 322 IPR016177 GO:0003677
Mal6g1428 543 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 541 - -
Mal6g1428 543 SMART rav1_2 356 420 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 SMART rav1_2 254 326 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 MobiDBLite consensus disorder prediction 490 509 - -
Mal6g1428 543 PRINTS Ethylene responsive element binding protein signature 396 416 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 PRINTS Ethylene responsive element binding protein signature 255 266 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 SUPERFAMILY DNA-binding domain 355 415 IPR016177 GO:0003677
Mal6g1428 543 Gene3D AP2/ERF domain 253 322 IPR036955 GO:0003700|GO:0006355
Mal6g1428 543 Gene3D AP2/ERF domain 356 416 IPR036955 GO:0003700|GO:0006355
Mal6g1428 543 ProSiteProfiles AP2/ERF domain profile. 356 414 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 Pfam AP2 domain 356 406 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 Pfam AP2 domain 254 312 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 ProSiteProfiles AP2/ERF domain profile. 254 320 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 Coils Coil 321 341 - -
Mal6g1428 543 CDD AP2 355 416 IPR001471 GO:0003700|GO:0006355
Mal6g1428 543 CDD AP2 253 320 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1428 Mal-Chr6 25645955 25649692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1428 226 543 AP2-EREBP Transcription Factor Family AT4G37750 61.755 6.50e-128 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal6g1428 AP2 3.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1428 K09285 - gmx:100812275 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1428 6 25645955 25649692 Mal5g3720 5 105053192 105056706 PCT