Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1427 ATGCTCTCTTCTCTCTATTCTTCCGATTTCACGGCGTTAGACGAAGGTTTAACGCCGTGGAATTTGTCTAACATTCTATCACCCTTCAAACCCACTAGCCCTAAGCTCACTTCAAGCTCCGGTTCAGGCGAACCAAACGAAAAACCGGTCATGGATGACTCAAACCGGAATATGGAGGACCGAAAGCGGAGGAGAATGATATCAAACCGGGAATCGGCACGGAGATCACGTATGAGAAAGCAGAGACATCTAGAGAATTTAAGGAACCAGGTGAACCGGTTTAGAGTTGAAAACCGGGAATTGAACAACGGTTTGCAGTTTTTATTGTATCAATGCAATCGTCTACGAACAGAAAACGAGTGGCTCCGGTTGGAACGAACCATGCTAAGTCAAAAATTGTCAAACATGAGTCAAAATTTGGTTTTTCAACCATTCTCATCTGCATGGCCATGCAATATTGTGACAGCTGAATAA 474 0.4388 MLSSLYSSDFTALDEGLTPWNLSNILSPFKPTSPKLTSSSGSGEPNEKPVMDDSNRNMEDRKRRRMISNRESARRSRMRKQRHLENLRNQVNRFRVENRELNNGLQFLLYQCNRLRTENEWLRLERTMLSQKLSNMSQNLVFQPFSSAWPCNIVTAE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1427 157 Gene3D - 60 112 - -
Mal6g1427 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Mal6g1427 157 MobiDBLite consensus disorder prediction 28 84 - -
Mal6g1427 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Mal6g1427 157 CDD bZIP_plant_GBF1 62 113 IPR045314 GO:0003700|GO:0006355
Mal6g1427 157 Coils Coil 70 104 - -
Mal6g1427 157 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Mal6g1427 157 MobiDBLite consensus disorder prediction 49 74 - -
Mal6g1427 157 Pfam bZIP transcription factor 59 120 IPR004827 GO:0003700|GO:0006355
Mal6g1427 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 21 157 - -
Mal6g1427 157 MobiDBLite consensus disorder prediction 28 45 - -
Mal6g1427 157 PANTHER BZIP TRANSCRIPTION FACTOR 21 157 - -
Mal6g1427 157 SUPERFAMILY Leucine zipper domain 61 112 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1427 Mal-Chr6 25608988 25609461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1427 4 142 bZIP Transcription Factor Family AT3G49760 38.571 9.03e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal6g1427 bZIP_1 6.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1427 - - gmx:102661188 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1427 6 25608988 25609461 Mal5g3711 5 104962723 104963250 PCT