Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1405 ATGGATACGTTGTTTAGACTTGTTAGTTTTCAACCACACCAACACCAACAAGATCAATCTCTCAACTCCACCACCAGCAGAACAACAACAACATCTAGTAGCTCTCGATCTTCAAAACAAAACTATCACCACAACAACTACTACGAACATGAAGTAGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGATCTTTCCTCATCTTCTTCTAAACACTACTATCCTTATAATCAACCCTCCACCACAACAATTACTACAAACACCCCCACACCAACATTCACACCTCCACAACCACCCCCTTCAACTGATTTCACCTTCGACTTAACCGGTAAGTGGGCCCACAACATCCTCCTAGAAACAGCACGTGCCATAGCTGAAAAAAACAGCACTCGTTTACAACAACTCATGTGGATGCTCAACGAACTAAGCTCCCCTTATGGCGACACAGAACAAAAACTCTCTGCATATTTTCTCCAAGCCTTATTCTCTCGAATGACCGAAGCCGGTACACGAACCTTTCGAACCCTAGCTTCGGCATCAGAAAAAACTTGCTCATTCGAATCAACAAGAAAAACGGTTCTAAAATTCCAAGAAGTTAGTCCTTGGACTACTTTCGGCCATGTTGCGTGCAATGGCGCGATTCTAGAAGCATTTGAAGGTGATTCCAAATTGCATATAATTGATATTAGTAACACTTATTGCACTCAGTGGCCAACGCTTTTCGAAGCATTGGCCACTCGTGCTGACGACACTCCTCACCTCCGTTTAACCACCGTCGTAACTGCCGGTGGTTCTGTTCAAAGAGTCATGAAGGAAATAGGTGCAAGGTTGGAGAAATTTGCTAGACTTATGGGAGTTCCGTTTAAATTCAATGTTCTTCATCACTCCGGCGATCTTTCTGATTTGGATTTTTCAAATTTAGATATTAAGGATGACGAGGCTTTAGCTGTTAATTGTGTTAACACTTTGCATTCAGTTACGGTTGGTAATGGTAACGGTAATAACCGTCGCGACGCGTTGATAGCTTCGTTGATCGCGTTGCGGCCGAGGATAGTGACGGTAGTGGAAGAGGAAGCTGATTTTAATTTTGGTTATGAAGGATATGAATTTGTGAATGGCTTTGAAGAATGTTTGAGATGGTTTAGGGTTTACTTCGAGGCATTGGAAGAGAGTTTTTCGAAGACGAGTAACGAGCGTTTGATGTTGGAAAGGGAAGCAGGGAGAGGTATAGTGGACTTGGTGGCATGTGCTCCGGCGGAGTCGATGGAACGGAGAGAAACGGCGGTGCGGTGGTCGCGGCGGTTGCATGGTGGAGGGTTTAATACGGTGGCATTTAGTGAAGAAGTTTGTGATGATGTTAGGGCTTTGTTGAGAAGGTATAAGGAAGGGTGGTCGATGATACGGTGTAATGATGCCGGAATATTCTTGACGTGGAAGGAACAACCGGTGGTTTGGGCCAGTGCATGGAGGCCTTGA 1479 0.4429 MDTLFRLVSFQPHQHQQDQSLNSTTSRTTTTSSSSRSSKQNYHHNNYYEHEVEEECFNFFMDEEDLSSSSSKHYYPYNQPSTTTITTNTPTPTFTPPQPPPSTDFTFDLTGKWAHNILLETARAIAEKNSTRLQQLMWMLNELSSPYGDTEQKLSAYFLQALFSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGDSKLHIIDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTAGGSVQRVMKEIGARLEKFARLMGVPFKFNVLHHSGDLSDLDFSNLDIKDDEALAVNCVNTLHSVTVGNGNGNNRRDALIASLIALRPRIVTVVEEEADFNFGYEGYEFVNGFEECLRWFRVYFEALEESFSKTSNERLMLEREAGRGIVDLVACAPAESMERRETAVRWSRRLHGGGFNTVAFSEEVCDDVRALLRRYKEGWSMIRCNDAGIFLTWKEQPVVWASAWRP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1405 492 PANTHER PROTEIN SHORT-ROOT 1 491 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Mal6g1405 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 491 IPR005202 -
Mal6g1405 492 ProSiteProfiles GRAS family profile. 105 491 IPR005202 -
Mal6g1405 492 MobiDBLite consensus disorder prediction 7 42 - -
Mal6g1405 492 MobiDBLite consensus disorder prediction 9 42 - -
Mal6g1405 492 Pfam GRAS domain family 116 491 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1405 Mal-Chr6 25257693 25259171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1405 1 492 GRAS Transcription Factor Family AT4G37650 59.555 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal6g1405 GRAS 6.5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1405 - - gmx:100797072 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1405 6 25257693 25259171 Mal6g1405 6 25257693 25259171 ECH
Mal6g1405 6 25257693 25259171 Mal5g3690 5 104636438 104637955 PCT