Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1404 ATGGGGAAGAAGCAACACAGCAAAGACCGAATGTTCTTAACCAAAACAGAGTGGGCAACCGAATGGGGAGGTTACAAATCCAAAGAAAATCGCACCGTTTTCAAACGTCTTCCTTTTTATTGCTGCTCACTTACGTTTACTCCGTTTGAGTTTCCAGTTTGTACACCTGACGGCAGTGTTTTCGATGTTATGAACATAACTCCATATATTATAAAATATGGTAAACATCCTGTCACTGGAGCTCCGTTGAAGCAGCAAGATCTCATTCCATTAACTTTTCACAAGAACTCAGAAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACACACATTGTGGCAATCAAGACTACTGGAAATGTATTCTGCTATGAGGCTGTTAAAGAGTTAAACATCAAGACAAAAAACTGGAAGGAGCTCCTGACCGACGAGGCATTTACTAGGGACGACCTTATAACAATTCAGAATCCTAATGCACTTGACCAGAAGGTTCTTCTGGATTTTGATCATGTTAAACAAAATTTGAAAATTGACGATGAAGAACTACAGAAAATGAGTTCAGATCCAGCCTATAACATAAATGTGTCGGGAGATATCAAACAAATGCTTAAAGAGCTTGGAACTGAACAAGGAAAGGAAACTGCATTGCATGGGGGAGGTGGTGGTAAGGCACAAAAAGAAAGGGCCGCTGCACTCGCTGCCATCTTAGCTGCACGGTCACAAGTTAAAGAAGACTCCAAATCGACCGATGGAGCTCCTCAGGCACTCAGTATTGTAGATGCTGCATCTGCCGCAGTTCATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCCAGAATAGCTATGCACGTGGCTGGTGACAGGGCACCGGTGAATGCAAAGATGGTTAAAAGTCGTTACACAACTGGTGCTGCTTCCCGGTCTTTTACTTCTACATCATATGATCCTGTTACAAAAAATGATTATGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAGGGATATGTACAACTGCATACAACACATGGTGATTTGAACATTGAGCTGCACTGTGATATAGCGCCCAGGGCATGTGAGAACTTTATCACGCTTTGTGAACGTGGATATTATAACGGAGTTGCTTTTCATAGAAGCATTAGGAATTTTATGATACAAGGTGGTGATCCTACTGGTACTGGTCGAGGTGGTGAATCAATTTGGGGAAAGCCTTTTAAGGATGAACTTAACTCCAAATTAGTCCACTCTGGAAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACATACTAATGGTTCCCAGTTTTTCATACTGTACAAATCTGCAAATCATTTGAACTTCAAACATACAGTTTTTGGAGGAGTGGTTGGTGGATTGACTACACTAGCAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTGGAGGAAATCAAGATAACAGGTGTCACAACTTTTGTCAATCCTTACACCGAACCAGATGAGGAAGAAGAACTAGCTAATGCCAAAGAGAAGAATGCAAATGATGAAGAAAATGACAAGGTTGGCTCATGGTATAGTAATCCTGGAGCCGGGACATCTGAATCTGGAGGTACAGGAGTTGGCAGCGGTGTTGGCAAATACTTGAAAGCTAGGAATGCTCTGGCTCAACCTGCTGCTGTCGACACCGGTACAGTTGTTGTAGGAAAGAAAAGAAAAGCAGTTGCCGGTGGTGAATTTAAAGATTTTTCTGCATGGTGA 1776 0.4229 MGKKQHSKDRMFLTKTEWATEWGGYKSKENRTVFKRLPFYCCSLTFTPFEFPVCTPDGSVFDVMNITPYIIKYGKHPVTGAPLKQQDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAIKTTGNVFCYEAVKELNIKTKNWKELLTDEAFTRDDLITIQNPNALDQKVLLDFDHVKQNLKIDDEELQKMSSDPAYNINVSGDIKQMLKELGTEQGKETALHGGGGGKAQKERAAALAAILAARSQVKEDSKSTDGAPQALSIVDAASAAVHGRSAAAAKASSSDKTAARIAMHVAGDRAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLATMEKVPVDDSDRPLEEIKITGVTTFVNPYTEPDEEEELANAKEKNANDEENDKVGSWYSNPGAGTSESGGTGVGSGVGKYLKARNALAQPAAVDTGTVVVGKKRKAVAGGEFKDFSAW* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1404 591 MobiDBLite consensus disorder prediction 525 545 - -
Mal6g1404 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 360 375 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 444 456 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 386 398 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 457 472 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 429 444 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 Coils Coil 504 524 - -
Mal6g1404 591 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Mal6g1404 591 CDD cyclophilin_RING 346 504 - -
Mal6g1404 591 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Mal6g1404 591 Gene3D - 326 510 IPR029000 -
Mal6g1404 591 SUPERFAMILY Cyclophilin-like 346 506 IPR029000 -
Mal6g1404 591 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 346 496 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 589 - -
Mal6g1404 591 MobiDBLite consensus disorder prediction 508 524 - -
Mal6g1404 591 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 350 497 IPR002130 GO:0000413|GO:0003755
Mal6g1404 591 SUPERFAMILY RING/U-box 37 105 - -
Mal6g1404 591 Pfam U-box domain 39 90 IPR003613 GO:0004842|GO:0016567
Mal6g1404 591 MobiDBLite consensus disorder prediction 503 546 - -
Mal6g1404 591 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 381 398 IPR020892 GO:0003755|GO:0006457
Mal6g1404 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 589 IPR044666 -
Mal6g1404 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Mal6g1404 591 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1404 Mal-Chr6 25244632 25250676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1404 1 591 U-box Gene Family AT5G67530 76.254 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1404 K10598 - gmx:100819923 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1404 6 25244632 25250676 Mal6g1404 6 25244632 25250676 ECH