Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1397 ATGGGGAGCTATGTTGGCACCCCTTTTTCTTTGTCTAGTCTTATGTGTCATGAACAAGATGAATCCACCTTCATCTTCGAAGAAGATGAAATTGAAAACACCCTCTTCATTAACTCACTTGATAATCACAATAACCCATGTTTTCTTTTGGAAGATGAAGAAGAATATATTGAGTATTTGTTCAAACAAGAAACAATATTTGGAACTCATTTCTTATCCTATGATGATGTTCATGTTGATGATGATGATGATTCAAGTAAAAGCTTATATTGGTTGAGAAATGCTCGATTACATGCTATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCACCCTTCAAACAGCTTATTTATCAACCACTTATTTTGATCGGTTTCTTTCAAATCGATCCATTGATGAATCTAAACCTTGGGCTATTCAATTGTTATCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGTGTTCCTCCACTATCAGAATATCCAATAGAATATAGATTTGAGAATAAAGTTATCAAGAACATGGAACTTTTGATTTTGAGTACTTTGGAATGGAAAATGAGTTTACCAACCCCTTTTGATTATTTACATTATTTCTTCACCAAGTTCTGCAATGGATCAAAATTGGATATAATAATCACAAAAGCCACACAACACATTGTGACATTGGTCAAAGATTTTAATTTGATGGATCAACGACCATCTATAATTGCTTCTGCTTCTATATTAGCAGCTTATGATTCCTCATTAACCAAAAAGGAAATTGATCTTCGGATTAGTGTAATCTCATCAAGTGGAAATCTAGAAAGTGAACATGTTTTTTCATGTTACAATGTAATACAAGAAAAGAGGAGAAACAAAGTTAAGAAGACACCTTCATCGGACTTATTATCAACAGAATCAAATTCCACATGTGTTGTTGTTGAGAACAAATCTAATGTTTGTTCAGGAGTTAAGAGAAAGCTTAGTTATGAAGAGATAAACATTGAAGATTTTCCTCCAGGACAAAAGCTACATCAACCTTAA 1041 0.3266 MGSYVGTPFSLSSLMCHEQDESTFIFEEDEIENTLFINSLDNHNNPCFLLEDEEEYIEYLFKQETIFGTHFLSYDDVHVDDDDDSSKSLYWLRNARLHAIDWIFNTQAKFGFTLQTAYLSTTYFDRFLSNRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMSLPTPFDYLHYFFTKFCNGSKLDIIITKATQHIVTLVKDFNLMDQRPSIIASASILAAYDSSLTKKEIDLRISVISSSGNLESEHVFSCYNVIQEKRRNKVKKTPSSDLLSTESNSTCVVVENKSNVCSGVKRKLSYEEINIEDFPPGQKLHQP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1397 346 Gene3D - 194 260 - -
Mal6g1397 346 PANTHER CYCLINS 43 326 IPR039361 -
Mal6g1397 346 CDD CYCLIN 96 185 IPR013763 -
Mal6g1397 346 Pfam Cyclin, C-terminal domain 195 292 IPR004367 -
Mal6g1397 346 Pfam Cyclin, N-terminal domain 91 193 IPR006671 -
Mal6g1397 346 SUPERFAMILY Cyclin-like 44 192 IPR036915 -
Mal6g1397 346 Gene3D - 94 193 - -
Mal6g1397 346 PANTHER CYCLIN-D5-1 43 326 - -
Mal6g1397 346 SMART cyclin_7 101 186 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1397 Mal-Chr6 25145448 25146876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1397 43 268 Core Cell Cycle Gene Families AT4G37630 38.889 1.41e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1397 K18811 - gmx:100798140 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1397 6 25145448 25146876 Mal6g1397 6 25145448 25146876 ECH
Mal6g1397 6 25145448 25146876 Mal5g3684 5 104547254 104548612 ECH