Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1396 ATGGCTAACATGGATGGCAAATCACTCCGGAATGCTAAGAAATTCATTCCGATACCACCTCCTTTGCCTCGATCAGCAGCAACCGGTTATCCTTGTGAGTATGCGGTGATGAATAATTTAGCACCGAGAGGGAGAAGCAGCTCTGTCTCTTCAGCAACAAGAGATCTGTGGGAGCGTCTTTTCAACGAAGGGTATAAAGCCGATGTTTGCATTAATACTGATAACGGTGGCATTGTTTATGCTCATTCTAACATTATTGCGGTGGCTTCTCCTGTATTGAGAGGCATGCTGAAACAAGCAAATCGTTCCAATCGGTGGCGATCAATCTCAATCTTTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATATTTGTACTCCTCCTGTTACGAGCAAGATGAAATGAAGGAATTTGTCCTACATTTGTTGGTGCTGTCACATGTATATGCGGTTCCTCACTTGAAGCATGAATGTGAACAGAAGCTAGAATTGGGTTTACTCACCATAGATAATCTAGTTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCGCGGCTCAGTCTCATTTGTCACCGTAAAATACTAAAGAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAAGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAATTCTGGAATCAATGATTGAAGAAGAAAATAGTAACAAGGAGAGGATCAGAAAAATGAATGAAAGAGAGGTCTATCTGCAATTATACGATGCAATGGAAGCTCTTGTTCACATATGTAGGGATGGTTGTCGAACTATTGGCCCGCATGATAAAGACTTCAAAGCAGACCAGCCGTGTAGGTATACATCTTGCAAAGGGCTAGAATTGCTTGTTCGTCATTTTGCTGGTTGCAAGTTGAGAGTCCCGGGGGGTTGTGTTCATTGCAAGAGGATGTGGCAACTGTTGGAGCTGCATTCTCGACTGTGTGGTGATCCGGATTTCTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGAGAATAGCAAAACAAAGCAAGAAAGACGAAATCAGATGGAAAATTTTGGTTGAAAAGATCTTGAAAACAAGAGGAATTGGGATTGCACCATGCTTTCGGCCACAATGA 1128 0.4246 MANMDGKSLRNAKKFIPIPPPLPRSAATGYPCEYAVMNNLAPRGRSSSVSSATRDLWERLFNEGYKADVCINTDNGGIVYAHSNIIAVASPVLRGMLKQANRSNRWRSISIFGVPHDAVRVFIRYLYSSCYEQDEMKEFVLHLLVLSHVYAVPHLKHECEQKLELGLLTIDNLVDVFQLALLCDAPRLSLICHRKILKNFKTVSESEGWKAMKQSHPVLEKEILESMIEEENSNKERIRKMNEREVYLQLYDAMEALVHICRDGCRTIGPHDKDFKADQPCRYTSCKGLELLVRHFAGCKLRVPGGCVHCKRMWQLLELHSRLCGDPDFCRVPLCRNFKQRIAKQSKKDEIRWKILVEKILKTRGIGIAPCFRPQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1396 375 SUPERFAMILY TAZ domain 244 343 IPR035898 -
Mal6g1396 375 Gene3D Potassium Channel Kv1.1; Chain A 41 167 IPR011333 -
Mal6g1396 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 9 373 IPR044513 -
Mal6g1396 375 SMART TAZ_2 244 336 IPR000197 -
Mal6g1396 375 Gene3D TAZ domain 242 363 IPR035898 -
Mal6g1396 375 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
Mal6g1396 375 SUPERFAMILY POZ domain 47 163 IPR011333 -
Mal6g1396 375 SMART BTB_4 67 167 IPR000210 GO:0005515
Mal6g1396 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 9 373 - -
Mal6g1396 375 Coils Coil 221 244 - -
Mal6g1396 375 Pfam TAZ zinc finger 252 335 IPR000197 -
Mal6g1396 375 CDD BACK 169 226 - -
Mal6g1396 375 Pfam BTB/POZ domain 59 163 IPR000210 GO:0005515
Mal6g1396 375 Gene3D - 168 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1396 Mal-Chr6 25114192 25116304 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mal6g1396 BTB 1.5e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1396 - - lja:Lj2g3v1968190.1 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1396 6 25114192 25116304 Mal6g1396 6 25114192 25116304 ECH