Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1395 ATGAATCTTCATAACTTCATCATCATCACAATCTTCTTCTTCTTCTTCTTCTTCACACTCTCACAATCCATCTCACTCAACACTGCAAAAAATGAATCCGATCATCATCACACAAGAAGAATTCTCCATCAACCATTATTCCCAGCGAGTTCAGCACCACCACCATCACCCACCGTCACACCACCACCACCGTCTTCATCCGATAACATTCCATTCTTCCATGAATATCCAGACGCACCACCGTCGAATCAGAATCAAGCTGCACCGTTAACTTCTAACGCCACAACGGCGAATCCAACGGCAACACAACCAGCAAAAGGAACAAAGAAAGTAGCAATTGTAATCTCCGTCGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTATATGCAAACACAGAGCAAAAAACACTGCGGATACACAGAAGCTAGTGAGTACTAACACACAGAGAAACAATTCTCTTCAGGATTCATTGAATTCATCTGCTCCGGTAGTAGCTTCGAATTTTCTCTATATTGGAACTGTGGAACCTTCGAGAAGGTCAACGACGGTCAACGATCAGAATCAAACGGAGAAGCCTAACCGTTCACCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGGCCGAGTCCGGAGTTACAGCCAATGCCGCCGTTGAGTAAACCTCCGGTCGATAACATCCCGCCGGCGATGTCGGAATCTTCTTCCGACGAAGAAAGTAACGAAACGGCGTTTCATTCGCCGCAAAACTCGTCAATAAGTCAGGAAGATGGATTTTACACGCCGTTTTCAGTTTCACGGCAGAGTTCTCTCGGTAACGGTAGTCCGGCGAAGAGAGAGAGTAATTCGACGGTTACGCCTCTTCCGAAATCGAAGAGAACTTCGCCGAAATCGAAATCTCATGTTTCGGCTTCTTCGCCGGATATTCGACACGTCATCATTCCGTCTATCAAGCAAACACCTCCACCGCCACGTCAGCAATCGGAGAAACAGTTAAACTCCTCTGGTGGAGTAGGACATTCTAGAAAACCAAAATTCTCAGCGCCGCCGCCACCTCCGAATTTGGCGCATCTTCAATCAACAACCAATACATTCTCACACGTTTCCAAAACTTCACATAATCGTCCTCCTCCTCCGCCACCACCACCGCCTCCGCCACCTCCACCTCCAATGGCACGAAAATCAGTGTCACCGACACCGGTGGTTTCGAGTTCTTCTGCGTCTATAAGGAGGTTAAGTGAAGGAGGTAATTCTGTAACAAAAGGTTCTGAATCAGTTTCAGATCATGTTGATGAGAGTTTGAATTTGAGATCTTCTTCCGAGAGGCTTGTTGAAGAAGCTAATGAAACGGAAGGTGGAAAACCGAAGTTGAAAGCGTTGCACTGGGACAAAGTTCGTGCAACTTCTGATCGTGCTACTGTGTGGGACCAGATAAAATCAAGCTCGTTTCAATTGAATGAGGATATGATGGAGTCTTTGTTTGGATGCAACAATGTAACGAATTCTGCTCCAAAACCAAAAGAACAAGGTGTTAGAAAATCAGTTCTTCCTTCAGCTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAAAATATAGCTATATTGTTAAGGGCACTGAATGTGACAAGAGATGAAGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGGGCTGAGCTATTGGAAACCCTTGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTAAGAAACTATGACGGAGATCTCTCAAAAGTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCATTCAAAAGAGTTGAAGCTATGTTATACAGGGCCAACTTTGACTCAGAAATCAACTATCTCAAGAAGTCTTTTCAAACCTTGCAGGATGCAAGTGAGGAATTAAGGAACAGTCGGTTATTCTTCAAACTCCTTGAAGCCGTTCTCAGGACAGGAAACCGAATGAATGTCGGCACTAATCGAGGTGATGCTAAAGCTTTCAAACTCGACACACTCCTAAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACACTGCTCCACTTTGTGGTCCAAGAGATCATTAGGTCTGAAGGTGCAGAAACTACATCTGCTAACGGAAGTATTCCTAACCAAATGGACTCCAAATTTAATGAGGAAGAGTTTAAGAAGAACGGATTGCATGTCGTGGCAGGTCTCAGTAAAGACCTTTGTAATGTAAAAAAAGCAGCAGGAATGGACTCGGATGTCTTAAGCAGCTACGTCACAAAGCTTGAGACAGGGCTTGAAAAAGTGCGGTTGGTTTTGCAATATGAGAAGCCAGATATGAGAGGCAATTTCTTCAACTCCACAAAGCTCTTTTTGAAATACGCAGAAGACGAAATTGTGAGGATTAAGTCTCATGAGAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTTGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCATTCAGAATAGCTTCAAATGCACCATTACCGGTTCTTAACAGGTACAATGGGAGACAAGATAGAAGCTCAGATGAGGAAAGCTCATCTCCTTAG 2718 0.4341 MNLHNFIIITIFFFFFFFTLSQSISLNTAKNESDHHHTRRILHQPLFPASSAPPPSPTVTPPPPSSSDNIPFFHEYPDAPPSNQNQAAPLTSNATTANPTATQPAKGTKKVAIVISVGIVTLGMLSALAFFICKHRAKNTADTQKLVSTNTQRNNSLQDSLNSSAPVVASNFLYIGTVEPSRRSTTVNDQNQTEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPVDNIPPAMSESSSDEESNETAFHSPQNSSISQEDGFYTPFSVSRQSSLGNGSPAKRESNSTVTPLPKSKRTSPKSKSHVSASSPDIRHVIIPSIKQTPPPPRQQSEKQLNSSGGVGHSRKPKFSAPPPPPNLAHLQSTTNTFSHVSKTSHNRPPPPPPPPPPPPPPPMARKSVSPTPVVSSSSASIRRLSEGGNSVTKGSESVSDHVDESLNLRSSSERLVEEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNVTNSAPKPKEQGVRKSVLPSADHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLRNYDGDLSKVGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLQDASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETTSANGSIPNQMDSKFNEEEFKKNGLHVVAGLSKDLCNVKKAAGMDSDVLSSYVTKLETGLEKVRLVLQYEKPDMRGNFFNSTKLFLKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGRQDRSSDEESSSP* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1395 905 PANTHER FORMIN-LIKE PROTEIN 6 905 - -
Mal6g1395 905 Gene3D Formin, FH2 domain 462 872 IPR042201 -
Mal6g1395 905 MobiDBLite consensus disorder prediction 235 311 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 363 378 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 79 105 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 403 430 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 379 401 - -
Mal6g1395 905 ProSiteProfiles Formin homology-2 (FH2) domain profile. 453 880 IPR015425 -
Mal6g1395 905 MobiDBLite consensus disorder prediction 329 346 - -
Mal6g1395 905 Pfam Formin Homology 2 Domain 456 854 IPR015425 -
Mal6g1395 905 PANTHER FORMIN-RELATED 6 905 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mal6g1395 905 SMART it6_source 453 869 IPR015425 -
Mal6g1395 905 MobiDBLite consensus disorder prediction 46 107 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 180 200 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 431 447 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 180 447 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 217 231 - -
Mal6g1395 905 SUPERFAMILY Formin homology 2 domain (FH2 domain) 385 864 - -
Mal6g1395 905 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1395 Mal-Chr6 25107661 25112112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1395 454 895 FH2 protein (formin) Gene Family AT5G67470 72.135 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1395 - - mtr:MTR_5g015690 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1395 6 25107661 25112112 Mal6g1395 6 25107661 25112112 ECH
Mal6g1395 6 25107661 25112112 Mal5g3683 5 104540234 104544205 PCT