Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1389 ATGGGTGAGGATGAATCAATTAGTGTGGTTGTGAGAGAGTTTGAAGTTAATAAAGATAGAGAAAGAGTAGAAGCAGTTGAAAGGACATGTGAAGTTGGACCTAGTAACCAACTTTTTCTCTTCACCGACATGCTTGGTGACCCCATTTGTAGAGTACGCCACTCACCTTCTTTCCTCATGCTGGTAGCTGAAATTGATGAAGAGATTGTTGGAATGATTAGAGGATGCATAAAAACCGTTACATGCGGTAAAACCATGTCAAGATCAAAAACAACTCTCACCAAACACCTCCCAGTTTACACGAAACTCGCTTACATTTTAGGCCTTCGCGTTTCTCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTAGTAAAAAAAATGGAAGCATGGTTTAAGGATAACGGTGCTGAATATTCATACATGGCAACGGAAACGGAAAATTTAGCGTCCGTTAAACTCTTCACACAAAAATGCGGTTATACAAAGTTCCGTACGCCGTCAATTCTCGTCAACCCCGTTTACGCTCACACAACAAAAATTTCACCAAATGTTACTATCATTCCGTTAACTCCTTCTGACGCCGTTATTCTCTACCGTAACCGTTTCTCCACCATAGAGTTTTTCCCTAATGACATTGATGCTGTTCTTAATAACAAACTTAATCTTGGTACTTTTCTTGCCGTACCACGTGGATCCTACAATGTTGAAACATGGCCTGGCCCAGATAGGTTTCTTTTGGGCCCACCTTGTTCTTGGGCTATTTTAAGTGTTTGGAATTCTAAGGAGGTTTTTACACTCGAGGTACGTGGCGCGTCGCGGGTGAAGCGCGGGCTTGCTAAAACGACACGTATTTTGGATCGGGCTTTGCCGTGGTTGAAGGTGCCGTCGGTTCCGGATTTGTTTCGGCCATTTGGGTTTCATTTTTTGTATGGGCTTGGTGGTGAAGGCCCAAAGGTGGTTAAGATGGTTAAGGCTCTTTGTGGGTTTGCACATAATATGGCTATGGAATGTGGGTGTGAAGTTGTGGTTACTGAGGTTGCTTCATGTGAACCATTGAGATTTGGTATACCTCATTGGAAAATGCTATCTTGTGCTGAGGATTTATGGTGTATTAGGAGACTTGTGGATGATTATAGTGATGGTTCTGTTGGTGATTGGACCAAATCTGTGCCCGAAATGTCCATATTTGTGGACCCTAGAGAGATTTAA 1212 0.4274 MGEDESISVVVREFEVNKDRERVEAVERTCEVGPSNQLFLFTDMLGDPICRVRHSPSFLMLVAEIDEEIVGMIRGCIKTVTCGKTMSRSKTTLTKHLPVYTKLAYILGLRVSPNQRRMGIGLKLVKKMEAWFKDNGAEYSYMATETENLASVKLFTQKCGYTKFRTPSILVNPVYAHTTKISPNVTIIPLTPSDAVILYRNRFSTIEFFPNDIDAVLNNKLNLGTFLAVPRGSYNVETWPGPDRFLLGPPCSWAILSVWNSKEVFTLEVRGASRVKRGLAKTTRILDRALPWLKVPSVPDLFRPFGFHFLYGLGGEGPKVVKMVKALCGFAHNMAMECGCEVVVTEVASCEPLRFGIPHWKMLSCAEDLWCIRRLVDDYSDGSVGDWTKSVPEMSIFVDPREI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1389 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 41 165 IPR016181 -
Mal6g1389 403 Gene3D - 10 168 - -
Mal6g1389 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 181 IPR000182 GO:0016407
Mal6g1389 403 Pfam Acetyltransferase (GNAT) family 54 161 IPR000182 GO:0016407
Mal6g1389 403 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 4 402 - -
Mal6g1389 403 CDD NAT_SF 60 139 - -
Mal6g1389 403 PANTHER N-ACETYLTRANSFERASE 4 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1389 Mal-Chr6 24909474 24911020 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mal6g1389 Acetyltransf_1 8.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1389 - - gmx:100800613 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1389 6 24909474 24911020 Mal6g1389 6 24909474 24911020 ECH
Mal6g1389 6 24909474 24911020 Mal5g3682 5 104469155 104470501 PCT