Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1388 ATGGCCATTAGGCCATTCCAATCCTCCACTCTATCGCTCCAACAATTCTTCTCTCTTTTCCGAACTCCTCATTCATTCTCCTCCTCCTCCGCCACCACCACAAACTTTTCCATCCTCCGTCGCTTTGCCACTTCATTCTCACGACCTCCTCGCCGCCCCCAACCTCCTCCTCCTCCTCCGCCGCAGCCCGACACTCTGGCGCAAAGAATCGGAAAATCCACTCGCCGCCCTGGCGCTTCCTCTAAGGCCAGAATTTACGCTGATATCAATGTTGTTCGACCTAAGGAATATTGGGATTATGAATCCCTCGCTGTTCAATGGGGGGAACAAGATGATTATGAGGTTTTGAGGAAGGTTGGAAGAGGGAAATACAGTGAAGTGTTTGAGGGTGTTCACTGTGGGAATGATGAAAAATGTATCATCAAGATACTCAAACCTGTGAGGAAGAAGAAGATAAAGAGGGAGATCAAGATATTGCAAAATCTTTGTGGAGGACCCAATATTGTAAAGTTGCTTGACATTGTTCGGGACCAGCAATCAAAGACCCCAAGCCTTGTATTTGAATGTGTCAATAACACCGATTTTAAAGTGCTCTATCCTACATTGTCTGACTATGATATACGATATTATATCTATGAACTTCTAAAGGCATTGGATTATTGCCACTCACAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTTATGATCGACCATGCACAGCGTAAGCTTTGCCTGATAGACTGGGGACTTGCAGAGTTTTATCATCCCGGGACAGAGTATAATGTCCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTACTTATTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGTCTCTCGGTTGTATGTTTGCTGGAATGATATTCCGGAAGGAGCCATTCTTTTATGGACAAGATAACTATGATCAACTAGTAAAAATAGCCAAGGTACTTGGAACAGATGAATTACGTGTGTATCAGGACAAGTATCGCATAGAGTTGGACCCACGTTTTGTAGTGCTTATTGGGAGGCATGACCGGAAACCATGGACGAAGTTCATTAATATGGATAACCAACACTTGGCTGTTCCTGAGGCTATTGACTTTCTTGACAAGTTACTACGGTATGATCACCAAGAACGGCTCACTGCAAAAGAAGCTATGGCCCACCCCTACTTCAATCCAGTGAGAAATGCAGAAAGCAGTAAAACTCGCACTCGCACTCGCACACATTGA 1251 0.4436 MAIRPFQSSTLSLQQFFSLFRTPHSFSSSSATTTNFSILRRFATSFSRPPRRPQPPPPPPPQPDTLAQRIGKSTRRPGASSKARIYADINVVRPKEYWDYESLAVQWGEQDDYEVLRKVGRGKYSEVFEGVHCGNDEKCIIKILKPVRKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLVFECVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHAQRKLCLIDWGLAEFYHPGTEYNVRVASRYFKGPELLIDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGQDNYDQLVKIAKVLGTDELRVYQDKYRIELDPRFVVLIGRHDRKPWTKFINMDNQHLAVPEAIDFLDKLLRYDHQERLTAKEAMAHPYFNPVRNAESSKTRTRTRTH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1388 416 ProSiteProfiles Protein kinase domain profile. 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1388 416 MobiDBLite consensus disorder prediction 49 65 - -
Mal6g1388 416 PANTHER CASEIN KINASE II SUBUNIT ALPHA 28 404 IPR045216 GO:0004674|GO:0006468
Mal6g1388 416 CDD STKc_CK2_alpha 94 398 IPR045216 GO:0004674|GO:0006468
Mal6g1388 416 SMART serkin_6 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1388 416 MobiDBLite consensus disorder prediction 45 80 - -
Mal6g1388 416 Pfam Protein kinase domain 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1388 416 PANTHER BNAA04G13490D PROTEIN 28 404 - -
Mal6g1388 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Mal6g1388 416 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mal6g1388 416 Gene3D Phosphorylase Kinase; domain 1 113 189 - -
Mal6g1388 416 Gene3D Transferase(Phosphotransferase) domain 1 190 398 - -
Mal6g1388 416 SUPERFAMILY Protein kinase-like (PK-like) 86 402 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1388 Mal-Chr6 24860422 24866933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1388 111 406 Core Cell Cycle Gene Families AT1G20930 30.000 5.73e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mal6g1388 Pkinase 2.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1388 K03097 - gmx:100776388 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1388 6 24860422 24866933 Mal6g1388 6 24860422 24866933 ECH