Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1374 ATGACTTATCTCGCCGATTACAGCACTACCATCATCAGAATCAATAATCAGAAGCCAATTTCTTCAATGTCAATTACACCAAACACCACCGTTTCATCACGCTACGTCGTCGTTTATGGATTCAGTACCTCTTCTGAATCAGTTTGGACAGATTTTCCCATAGAGAATGCGTACGAGCTTCTAGAAGTTTCGGAAACAAGCTCATTCGATGAGATCAAAGCTTCGTTTCGAAAATTGGCTAAAGAAACTCACCCTGACCTTGCTGAGTCGAGGAATGATTCCACTGCATCGAAACGATTTGTTCAAATCCTCGCAGCTTATGAGATTCTTTCAGATGCTAGGAGGAGAGCCCATTATGACATGTACTTGTTTTCTCAGAAAAAGCTTATGCAGAAGCGTTCTGAACAGGGTTCAAAATTGCGCATTTACGAATCACAGGCTACTGCATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTATAGATTAGCTATAAACGATATTTTGTCAGAGAAGAAGGTGGTAGTTGGAACAGGATATTTTGATGTACTCGAGAGAGATTTTTATTCTGCTATTCATGCAGCATACTACGGTCCCGAAATTGATTCTATCCCCATGGAGTTTCTTCCTGACTGTTTTGAGGCTGAAGAGAGGTCCTCTAATGAAACTCCTGAGGTTTTGCACTTGGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGATTCCAGAGATATCATCTACTGAAAATGAAAAGTTATCTTCTTATAGAACCTTCCATTCGGGCCTTTGTCAATCTATAATGGATGTGAACACCCGCAGGAATGTAGAAAGGCCAGATGATTTTGGAACTCAATGTGGCCGCAGCTCTAAAATTTCAAATAATGTATTAGATGCGTATAGAGATCTAGAATTGCATGTGTCTGGAAAATTAGTTGCTACAGCATCTAGGGTCCTACCTAGATGTTCTAATGCAATGCAAACGGAAGATGCCGAAGATCACATTCATGTGTTCCTTAATTCAGACGAAGATCCCAGACATATCAGCAGTGGCTTTTCAAGAAATTTATTTACACATAGCACAGGTGGCATCAAAATGCACTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGACGAAGGATGTTGTTATGTCTACAACAGCAACCGTGAAAAGACCCATGCGATTATGAAACATAGAACATTATTGGTGAAGCATATGCACTGGTATCATGTTGGTGAGGAAGTTGCAGTTTGTGAGTGTAGATGCACCAGAGCACGTTTACCACCAAGCAAGGGGTTGGTATGTTGA 1323 0.4112 MTYLADYSTTIIRINNQKPISSMSITPNTTVSSRYVVVYGFSTSSESVWTDFPIENAYELLEVSETSSFDEIKASFRKLAKETHPDLAESRNDSTASKRFVQILAAYEILSDARRRAHYDMYLFSQKKLMQKRSEQGSKLRIYESQATAFKEMEVVEWLKWYRLAINDILSEKKVVVGTGYFDVLERDFYSAIHAAYYGPEIDSIPMEFLPDCFEAEERSSNETPEVLHLVSGRDLFGMVCLVNKIPEISSTENEKLSSYRTFHSGLCQSIMDVNTRRNVERPDDFGTQCGRSSKISNNVLDAYRDLELHVSGKLVATASRVLPRCSNAMQTEDAEDHIHVFLNSDEDPRHISSGFSRNLFTHSTGGIKMHLGTISGLGSSPDEGCCYVYNSNREKTHAIMKHRTLLVKHMHWYHVGEEVAVCECRCTRARLPPSKGLVC* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1374 440 PRINTS DnaJ domain signature 95 115 IPR001623 -
Mal6g1374 440 PRINTS DnaJ domain signature 76 91 IPR001623 -
Mal6g1374 440 PRINTS DnaJ domain signature 58 76 IPR001623 -
Mal6g1374 440 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 15 436 - -
Mal6g1374 440 Pfam DnaJ domain 56 120 IPR001623 -
Mal6g1374 440 SUPERFAMILY Chaperone J-domain 47 124 IPR036869 -
Mal6g1374 440 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Mal6g1374 440 ProSiteProfiles dnaJ domain profile. 56 123 IPR001623 -
Mal6g1374 440 SMART dnaj_3 55 115 IPR001623 -
Mal6g1374 440 Gene3D DnaJ domain 49 143 IPR036869 -
Mal6g1374 440 CDD DnaJ 56 112 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1374 Mal-Chr6 24633304 24636865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1374 58 122 C2H2 Transcription Factor Family AT1G74250 42.647 3.85e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1374 - - mtr:MTR_5g016110 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1374 6 24633304 24636865 Mal6g1374 6 24633304 24636865 ECH