Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1346 ATGGCCGTTGAACTCATCATGGGATACAAATTCGAAGAGAATGCAGTTGAAGAAGCTGCTTCTGGTTTACAAAGCATAGAGAAACTCATAAAATTGCTATCATCATCATCACAAACATGTTCTTCAAATTTAAACTCTAATTCAATGGACTACAAAACCGTAGCTGATGTAGCTGTTTCAAAGTTTAAGAATGTTATTTCACTTTTGAGTCAAAACAGAACAAGAACTGGTCATGCTCGTTTCAGAAGAGCACCTTTACCTTCTACATCTTCTGAAACTAGAGTCTACCGTGCTACTCCGTTGCAGCAGATTCCTCCTCTAATCCCCAACAATGAAGTTATTGATAAGAAGAAGAATATCATTGATTTCTCTTATTCCTCTCAGGTTTCTTCTTCCTTGGGAAAGTCTTGTGTTTCTTCGTGTTCGTTGAAGAGAAAGTGTAGCTCTGAGAATTTTGGTTCTGGCAAGTGTGGTAGTTCATCTAGTCACTGTCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAAAGAGTGGTGAGGGTAGCAGCAATAAGTTTGAAGATGGCTGATATTCCAACTGATGAATATTCTTGGAGGAAGTATGGTCAGAAACCTATTAAAGGATCACCTCATCCAAGGGGTTATTACAAGTGCAGCAGTGTTAAAGGGTGTCCAGCACGCAAACATGTAGAGAAAGCTTTGGATGATCCATCTATGTTGGTAGTTACTTATGAAGGTGACCACAATCACTCCCTCTCTACAACTGAAGCTAACAATCTCATCCTAGAATCCTCTTGA 795 0.3899 MAVELIMGYKFEENAVEEAASGLQSIEKLIKLLSSSSQTCSSNLNSNSMDYKTVADVAVSKFKNVISLLSQNRTRTGHARFRRAPLPSTSSETRVYRATPLQQIPPLIPNNEVIDKKKNIIDFSYSSQVSSSLGKSCVSSCSLKRKCSSENFGSGKCGSSSSHCHCSKKRKMRLKRVVRVAAISLKMADIPTDEYSWRKYGQKPIKGSPHPRGYYKCSSVKGCPARKHVEKALDDPSMLVVTYEGDHNHSLSTTEANNLILESS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1346 264 Pfam WRKY DNA -binding domain 193 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1346 264 SUPERFAMILY WRKY DNA-binding domain 188 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal6g1346 264 ProSiteProfiles WRKY domain profile. 186 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1346 264 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 122 264 IPR044810 GO:0003700
Mal6g1346 264 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 106 IPR044810 GO:0003700
Mal6g1346 264 SMART WRKY_cls 191 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal6g1346 264 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 122 264 - -
Mal6g1346 264 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 10 106 - -
Mal6g1346 264 Pfam Plant zinc cluster domain 144 189 IPR018872 -
Mal6g1346 264 Gene3D WRKY domain 176 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1346 Mal-Chr6 24044352 24046145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1346 1 84 WRKY Transcription Factor Family AT2G24570 43.023 2.57e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal6g1346 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1346 - - mtr:MTR_5g016610 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1346 6 24044352 24046145 Mal6g1346 6 24044352 24046145 ECH
Mal6g1346 6 24044352 24046145 Mal5g5202 5 125960646 125962220 PCT
Mal5g3631 5 103059063 103060604 Mal6g1346 6 24044352 24046145 PCT