Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1336 ATGAAGAATGCCTCATCACATTTGCTAAAAAAGGAGAAACAAATACTCGACTATTTAGGATCATCTAGACATATTATCAGATGTTTTGGCGAAGATCAAACTTTTGAATATGGCGAAGAATCTGATAATATTTTTCTTGAATATGCCGAAGGTGATACTCTCTTCGATCAACTCAAGAATCATGGTGGTAAATTCACAGAAACCCTCGTTCGCCGTTACACAAGGTCGGTTGTTGAAGGACTCAAACATGTTCATACAACTATAGTTTAA 270 0.3593 MKNASSHLLKKEKQILDYLGSSRHIIRCFGEDQTFEYGEESDNIFLEYAEGDTLFDQLKNHGGKFTETLVRRYTRSVVEGLKHVHTTIV* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1336 89 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 86 - -
Mal6g1336 89 Gene3D Transferase(Phosphotransferase) domain 1 1 89 - -
Mal6g1336 89 SUPERFAMILY Protein kinase-like (PK-like) 7 86 IPR011009 -
Mal6g1336 89 Pfam Protein kinase domain 9 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1336 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1336 89 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1336 Mal-Chr6 23835225 23835494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1336 6 85 MAP Kinase Kinase Kinase AT4G36950 51.250 4.09e-23 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal6g1336 Pkinase 4.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1336 - - aprc:113869133 114.39