Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1326 ATGGCTGATGAAGATGGTAGCTCAAGCAGAAAGCGAAGACCAACCCGAGGCCCCGACGCCACCGCACGCAGCCAAGCACTCGAGCTTCTCCGATCCCGCAGATCCAACGGTCCTCGATCTACCACCACACCACAAATCCGACTCGAAAACCCTATCTACGACACAATCCCCGAGGAAGAATACACCGCCTTAGTCGCTAGCCGCCGCGAACAATCCCGCTCATTCATCGTCGATGACGACGGATTCGGTTACAACGACGAAGGCGAAGAAGAGGATTGGTCGAAAGCAGGTGTATCCTTCTCAGATGAAGATGAATTTGAAGATGAATCGGAGAAACCTAAACGTAAGAAGGAGAAAGACGCTTCGCAGAGTAAGCGTCCTTCTGCTTCTTCTACTGCGGCTAAATTATCTGCTGCTGCTGCTATGATGGGCGGATCGAGAGTGTCGTCGATGTTTACTTCCGCGGTTTTTAAGAAAAGTAGAGATGATAAGGTTTGTGAGAGTATTGTTGATGATGTTCTTAAGGAGTTTGCGCCGGATGAGAACGATAAACTTAGCCGTAGAAAGGTTCAATCGAATTTGTCTGCAAATGATGCACGGATTAAGGCTAAACCTAAGCCCTCAGTTGTAGAGAATTTCGTGAAAATTGGAAATGGTGATACTGAATCTGTTAGGGTTAGGGTTAATAAGGATGAGGATATGGATAATGGATCTAGATTAGGATTAGGGTTAGAGAAAAAGTGTGAAGTGGAAGTGAATGAAAATTTGGGAAATGGTGAGGGAGGGATGGTGGTGGAAGATAATGATTTGCCAAGTAATGGGGATTTAGTTGAAGAGAAAGTGGCTAAGGTGAAAGACGTAGAAATGGAAGTGAAACCTGTTGTGAAAAAGGAGGGTTTTACTTTGAATGCGAAAGTTAGTGAAGATGTGGTTGATCCGAAGTTGTGTGCTACTGCTGGTTGGCAGGCGGCGAGAAGTGGTGGAGGTGGGGAGGTGAATGTTGCGGATTCTAATAATCAACAACAGGCCGAGTTCAATTTGGAGCCGGAGGGATCATTGCCTTTTTATATACTTGATGCTTATGAGGAGTATTATGGAGCTAATATGGGTACTCTTTATTTGTTTGGGAAGGTCAAAACAGGGAATTTGTATCGGAGTTGCTGTGTTGTTGTGAAGAACATGCAGAGGTGTGTCTACGCGATTCCAAGTCATCCTTTGCATTCCACCGATGAGATGATACAACTTGAGAAAGATGTCCAAGAGTCTCGAGTTTCTCCTGCAGATTTCCGTAAAAAGCTGCAAGATGCAGTAGCTGATACAAAGAATGAGATAGCAAAACATCTAATGGATCTGGGTGTTTCTACCTTTAGCATGGCACCTGTTAAGAGGAAATATGCATTTGAACGATCCGACATTCCTGTAGGTGAAAATTATGTGGTGAAAATAAATTATCCGTTCAAGGATACAGCACTTCCAGTAGACCTCAAAGGAGAAAATTTCTGTGCTCTTCTTGGAGCTCGAAACAGTGCACTTGAGCTATTTCTAATTAAAAGAAAGATTAAGGGGCCTTCATGGCTACAAGTTTCAAATTTTTCTACCTGCTCAGCTTCCCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTTAACTCTCCTAAAGACATAAGGGTTTCATCTTCCTCAAAAATCACTCTACTGATTCCTCCTGTGATTGTCACAGCAATAAACTTGAAGACAACCATAAATGAAAAACAGAACATTAATGAAATTGTATCTGCATCTGTTGTCAGTTGCAATATGGTTAAGATTGACACTCCTATGCTGGCTTCTGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTCATTCGCAAACTTGATGGGAATATATTCCCAATGGGATTTAATAAGGAGGTCACGGACAGAAACACAAAAGCTGGGTCAAATGTTCTGTCTGTTGAAAGCAGTGAAAGGGCTTTGTTAAATCGTCTAATGTTAGAATTACACAAGATGGATAGCGACGTTCTTGTTGGACATAATATTTCTGGATTCGACCTCGATGTTCTTCTCCACAGATCTCAGGCTTGCAGAGTAGCAAGCAGCATGTGGTCTAAACTGGGCCGTCTCAACCGTTCTACGATGCCTAAGCTTGACAGAAGAGGCAAAACATTTGGTTTTGGAGCTGATCCTGCTATAATGTCTTGTGTTGCCGGTCGGCTTCTTTGTGATACGTATTTGTGTTCCCGTGACCTATTAAAGGAGGTTAGTTATTCTTTAACCCACCTGGCGAAAACACAGCTAAACCAGTCTCGGAAGGAAGTTGCTCCACATGAAGTTCCAAAAATGTTCCAAACTGCAAAATCCTTGATGGAGCTAATTGAATATGGTGAAACGGATGCATGGTTGTCTATGGAACTCATGTTTTATTTGAGTGTCCTTCCTCTCACACGCCAGTTGACTAATATAAGTGGCAATCTATGGGGGAAAACTCTTCAGGGTGCCCGGGCACAGAGGGTGGAGTATCTTTTGTTGCACGAGTTCCATAAAAAGAAATATATTGTTCCAGACAAGTTTTCTAATTACACAAAAGAAACAAAATTGACGAAGCGCAGAGTAACTCATGGTGTCGATGATGGCAACTTTGACGAAGCAGATATTAGTGATGCAAACTATCATAATGATGCTTCTGAAAGTGATCATAAGAAAAACAAAAAGTCTGCTTCCTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATATGACAAATACATATTACTTCTGGACTTCAACAGTCTATACCCTTCTATCATTCAGGAATATAATATCTGCTTCACGACTGTTGAAAGATCTTCAGATGGATCTTTTCCTCGTCTGCCATCTAGTAAAACAACTGGAGTCTTGCCAGAGTTGCTGAAAAATCTGGTTAAGTGGAGGCGAAACGTAAAGAAATGGATGAAGGATGCATCTGGTCTTAAACGTCAGCAACTGGATATTCAGCAGCAAGCACTGAAGCTTACTGCAAACAGTATGTATGGATGCTTGGGATTTTCCAATTCAAGATTTTATGCAAAGCCACTGGCTGAGCTCATAACCCTACAAGGAAGGGAGATACTACAGAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTGATCTATGGTGATACTGATTCAATAATGGTTTACAGTGGGCTAGATGATATTGCAAAAGCAACTTCAATATCTAAGAAAGTTATTCAAGAGGTCAATAAGAAATATAGGTGCTTAGAAATTGATCTTGATGGTTTGTATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTTAAGGTGCTGCAGTCTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTGTTAGCGAAAGATTTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGCGAAGATGTTGTTGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCATTGGAAAAATACGTCATCACAAAGACATTGACTAAACCACCCGAAGCATACCCTGATGCCAAAAACCAGCCGCATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACACCTCTGGTTGCTCTAGCGGTGATACAATCCCTTACATAATTTGCTGCGAGCAGGGTGGTAGTTCAGGAAGTGCAACGGGAATTGCTCTACGTGCCAGACATCCTGATGAATTAAAACGAGAACAGGGGACATGGCTAATTGATATTGATTACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGCACAAGCCCTGAAAGACTGGCTGATTGTTTAGGGCTTGACACATCAAAGTTTCAACATAAATCAAGTGAAGCATTAAGTGACGATCCTACAAGCTCACTCTTATTTGCTAGTGATGATGAGGAGAGGTATCGGGGATGTGAGTCATTGGTCTTGTCATGCCCCAGCTGCTCTGGCACATTTGACTGCCCACCTGTGTTTAAATCTATTTGTATGTTGGGAAATGAAAAGCCAACCAGCTCAGGCGCGGAGGAACCTGACTACCATTTCTGGCGCAAGCTATGCTGTCCCAAATGCTCTGAAAATGGCGTTGGTAGAATTTCTCCTGCCATGATAGCCAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTTTAATGTATTATAGAGGTTTACTTATTTGTGATGATGAAACATGTAAGCATACAACGCGAAGTGTCAGCTTTCGTTTGGTTGGTGATTCTGAGCGAGGGACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGTACACTGAAGCTGACTTGTACAAGCAGCTCTCATATTTTTGTCACGTGTTTGATACTGTTTCTTGTATAGAAAAGATGGAGGCAAAGTCTAGGATACCAATAGAGGAGTTGATCAAAATTAGGCCAATAGTTGATCTTGCTGCATCAACAATACAAAAGATCCGGGACCGTTGTGCCTTTGGATGGGTGAAGCTCCAGGACTTGGTTATTACAATTTAA 4617 0.4224 MADEDGSSSRKRRPTRGPDATARSQALELLRSRRSNGPRSTTTPQIRLENPIYDTIPEEEYTALVASRREQSRSFIVDDDGFGYNDEGEEEDWSKAGVSFSDEDEFEDESEKPKRKKEKDASQSKRPSASSTAAKLSAAAAMMGGSRVSSMFTSAVFKKSRDDKVCESIVDDVLKEFAPDENDKLSRRKVQSNLSANDARIKAKPKPSVVENFVKIGNGDTESVRVRVNKDEDMDNGSRLGLGLEKKCEVEVNENLGNGEGGMVVEDNDLPSNGDLVEEKVAKVKDVEMEVKPVVKKEGFTLNAKVSEDVVDPKLCATAGWQAARSGGGGEVNVADSNNQQQAEFNLEPEGSLPFYILDAYEEYYGANMGTLYLFGKVKTGNLYRSCCVVVKNMQRCVYAIPSHPLHSTDEMIQLEKDVQESRVSPADFRKKLQDAVADTKNEIAKHLMDLGVSTFSMAPVKRKYAFERSDIPVGENYVVKINYPFKDTALPVDLKGENFCALLGARNSALELFLIKRKIKGPSWLQVSNFSTCSASQRVSWCKFEVTVNSPKDIRVSSSSKITLLIPPVIVTAINLKTTINEKQNINEIVSASVVSCNMVKIDTPMLASEWKRPGMLTHFTVIRKLDGNIFPMGFNKEVTDRNTKAGSNVLSVESSERALLNRLMLELHKMDSDVLVGHNISGFDLDVLLHRSQACRVASSMWSKLGRLNRSTMPKLDRRGKTFGFGADPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPHEVPKMFQTAKSLMELIEYGETDAWLSMELMFYLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHEFHKKKYIVPDKFSNYTKETKLTKRRVTHGVDDGNFDEADISDANYHNDASESDHKKNKKSASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLKNLVKWRRNVKKWMKDASGLKRQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKATSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVLQSKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYTSGCSSGDTIPYIICCEQGGSSGSATGIALRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEALSDDPTSSLLFASDDEERYRGCESLVLSCPSCSGTFDCPPVFKSICMLGNEKPTSSGAEEPDYHFWRKLCCPKCSENGVGRISPAMIANQVKRQAEKFVLMYYRGLLICDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVSCIEKMEAKSRIPIEELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVITI* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1326 1538 Gene3D - 355 554 - -
Mal6g1326 1538 SMART polmehr3 568 1070 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mal6g1326 1538 MobiDBLite consensus disorder prediction 28 49 - -
Mal6g1326 1538 Pfam DNA Polymerase alpha zinc finger 1332 1534 IPR015088 GO:0003887|GO:0006260
Mal6g1326 1538 Gene3D DNA Polymerase alpha, zinc finger 1331 1523 IPR038256 -
Mal6g1326 1538 MobiDBLite consensus disorder prediction 108 124 - -
Mal6g1326 1538 Pfam DNA polymerase alpha subunit p180 N terminal 27 93 IPR024647 -
Mal6g1326 1538 Pfam DNA polymerase family B 827 1291 IPR006134 GO:0000166|GO:0003677
Mal6g1326 1538 CDD DNA_polB_alpha_exo 568 819 - -
Mal6g1326 1538 TIGRFAM pol2: DNA polymerase (pol2) 52 1289 - -
Mal6g1326 1538 ProSitePatterns DNA polymerase family B signature. 1058 1066 IPR017964 GO:0000166|GO:0003676
Mal6g1326 1538 MobiDBLite consensus disorder prediction 1 18 - -
Mal6g1326 1538 MobiDBLite consensus disorder prediction 67 138 - -
Mal6g1326 1538 CDD POLBc_alpha 903 1307 IPR045846 GO:0003887|GO:1902975
Mal6g1326 1538 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 333 1536 - -
Mal6g1326 1538 Gene3D Helix hairpin bin 966 1017 - -
Mal6g1326 1538 Gene3D - 568 881 IPR036397 GO:0003676
Mal6g1326 1538 Gene3D Palm domain of DNA polymerase 896 1120 IPR023211 -
Mal6g1326 1538 SUPERFAMILY Ribonuclease H-like 350 856 IPR012337 -
Mal6g1326 1538 Gene3D - 1135 1321 IPR042087 -
Mal6g1326 1538 PANTHER DNA POLYMERASE 333 1536 - -
Mal6g1326 1538 Coils Coil 430 450 - -
Mal6g1326 1538 PRINTS DNA-directed DNA-polymerase family B signature 927 940 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mal6g1326 1538 PRINTS DNA-directed DNA-polymerase family B signature 1003 1015 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mal6g1326 1538 PRINTS DNA-directed DNA-polymerase family B signature 1056 1064 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mal6g1326 1538 Pfam DNA polymerase family B, exonuclease domain 385 761 IPR006133 -
Mal6g1326 1538 Gene3D - 395 521 - -
Mal6g1326 1538 MobiDBLite consensus disorder prediction 1 53 - -
Mal6g1326 1538 Coils Coil 1084 1104 - -
Mal6g1326 1538 SUPERFAMILY DNA/RNA polymerases 852 1306 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1326 Mal-Chr6 23629407 23641805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1326 5 1536 Core DNA Replication Machinery Family AT5G67100 60.231 0.0 1834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1326 K02320 - gmx:100798779 2242.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1326 6 23629407 23641805 Mal6g1326 6 23629407 23641805 ECH