Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1321 ATGGATAAAGGAGAAGAGGCTCAGGCTGCTGTTGATCAATTTAACGCTACTGAAATATCAGGCCGGATAATAAGGATAGAGTTTGCAAAGAGATTCAAGAAACCTCCTCCTCCACCTCCTCCAGGTCCCCCTCCTAGCGAGGCACGTCATGTAATCTATGCATCCAACCTTGCATGGAATGCAAGATCTACACATCTTAGAGACATCTTCACTGAGAATTTCAAAACACCAGTTTCAGCCAGGGTTGTCTTTCAAACGCCTGCTGGGAGATCTGCTGGGTATGGGTTTGTTTCTTATCATACTAAGGAGGAAGCAGAGTCTGCCATTTCTGCTTTGCAAGGGAAGGAGTTAATGGGACGACCACTTCTCGTAAAAATAAGTGAAAAGAAAGTTAAAGAAGCTGAAAGTGAAGAAGGTGAAGTTAAAGAAGCTGAAAGTGGAGAAGGTGAAGAGCAAGATGAAAACGCTCAACCGGAAGAGTCATAA 486 0.4383 MDKGEEAQAAVDQFNATEISGRIIRIEFAKRFKKPPPPPPPGPPPSEARHVIYASNLAWNARSTHLRDIFTENFKTPVSARVVFQTPAGRSAGYGFVSYHTKEEAESAISALQGKELMGRPLLVKISEKKVKEAESEEGEVKEAESGEGEEQDENAQPEES* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1321 161 Gene3D - 48 125 IPR012677 -
Mal6g1321 161 MobiDBLite consensus disorder prediction 140 161 - -
Mal6g1321 161 MobiDBLite consensus disorder prediction 130 161 - -
Mal6g1321 161 SUPERFAMILY RNA-binding domain, RBD 35 132 IPR035979 GO:0003676
Mal6g1321 161 Gene3D - 1 37 IPR012677 -
Mal6g1321 161 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 122 IPR000504 GO:0003723
Mal6g1321 161 SUPERFAMILY RNA-binding domain, RBD 4 43 IPR035979 GO:0003676
Mal6g1321 161 PANTHER CHLOROPLAST, PUTATIVE-RELATED 1 146 - -
Mal6g1321 161 PANTHER OS02G0815200 PROTEIN 1 146 - -
Mal6g1321 161 SMART rrm1_1 51 125 IPR000504 GO:0003723
Mal6g1321 161 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 129 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1321 Mal-Chr6 23541195 23544585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1321 52 141 Eukaryotic Initiation Factors Gene Family AT4G34110 30.000 4.82e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1321 - - gmx:100792275 183.726