Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1318 ATGAATTGGGTTCGTGGTGAGTCACTAGGTAGTGGATGCTTTGCCACCGTTTATAAAGCCAAACACCCCAAACACTGTGATACCTTTCCACCCCTTACCGCGGTCAAAACTTGCAATCTTCACGAGTCCTATTCTCTCCAACACGAGAAACAGATACTCGATCGTTTAGGATCATCACCATATATTATCAAATGTTTTGGTCAAGATCAAACTGTTGAAGACGGCGAAGAGTATTATAATATTTTTCTAGAGTATGCTGGTCGTGGAACTGTCTCCGATCAACTCAAGAACCATGGTGGTAAGCTCCCGGAAAAACTCGTTCGTCGTTATACAAGATCCATCGTTGAAGGACTTAAGTATATTCACGAAAAAGGTTTTGTTCATTGCGACTTGAAGTTGCCCAACATTCTCGTATTCGACAATGGCAATGTTAAGATTTCAGATTTCGGTCTTGCAAAAGAGATAGGGATAGAACATGGTGAAAAGTGGCAAAATAGAGGAACTCCTATGATTATGTCACCAGAGGCAGTGAACGATAGTGTGTATGAATCGCCAGCAGATATATGGGCTCTTGGTTGCGCCGTTGTGGAGATGGTTACTGGAGAACCCGCATGGAATGTGAGTGACGAGTTGATGTTGTTTATTCGAATTGGGGTTGGAGAAGAATTACCAACGATTCCAGATGAATTATCAAAAGAAGGGAAAGATTTTCTTGAAAAGTGTTTCGTTAAGGATCCTTTGAAAAGATGGAGTGCAGAGATGCTTTTGAACCACCCGTTTATCTCCGATGTTGAAACTGTTTCAGTTGTGAAAGAGTTAGTTGATGAGTCGTCATTGCCTTCATCCTCTCCAAAAACTCACTTTGATTTCCTCATTGTTCTTCTTCTAATGTTACGATATTGCCTCCTAATTCAGAGGAATGGAGTGGATCGAAAATAA 939 0.4111 MNWVRGESLGSGCFATVYKAKHPKHCDTFPPLTAVKTCNLHESYSLQHEKQILDRLGSSPYIIKCFGQDQTVEDGEEYYNIFLEYAGRGTVSDQLKNHGGKLPEKLVRRYTRSIVEGLKYIHEKGFVHCDLKLPNILVFDNGNVKISDFGLAKEIGIEHGEKWQNRGTPMIMSPEAVNDSVYESPADIWALGCAVVEMVTGEPAWNVSDELMLFIRIGVGEELPTIPDELSKEGKDFLEKCFVKDPLKRWSAEMLLNHPFISDVETVSVVKELVDESSLPSSSPKTHFDFLIVLLLMLRYCLLIQRNGVDRK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1318 312 Gene3D Transferase(Phosphotransferase) domain 1 2 300 - -
Mal6g1318 312 ProSiteProfiles Protein kinase domain profile. 3 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1318 312 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 290 - -
Mal6g1318 312 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g1318 312 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Mal6g1318 312 CDD STKc_MAPKKK 2 261 - -
Mal6g1318 312 SUPERFAMILY Protein kinase-like (PK-like) 3 287 IPR011009 -
Mal6g1318 312 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 290 - -
Mal6g1318 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Mal6g1318 312 SMART serkin_6 3 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1318 Mal-Chr6 23495181 23496119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1318 1 290 MAP Kinase Kinase Kinase AT3G50310 52.159 4.38e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal6g1318 Pkinase 5.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1318 - - mtr:MTR_5g017140 517.694