Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1285 ATGTCGCAGCGGTCGGCGCCGGCGCCGTTTTTGTTGAAGACGTATCAAATGGTGGATGATTTTGCGACGGATGATGTGATATCATGGAGTGAAAGTGGTGAAAGTTTTGTTGTGTGGAAACATGCTGATTTTGCAAGGGATTTGCTTCCTAAATATTTCAAGCACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACCTATGGATTCCGAAAGCTCGTGCCAGATAAATGGGAATTCGCAAACGAACATTTCAAACGAGGCCAAAAACACCTCCTGACCAATATCAAACGCCGCAAAACCATTCCACAACCATCGTCACAACCTTTAGAAGCCGAAAAAACCAACACCAACGACAACTCTCCATCAAACTCCGGCAATGACGGAGTTGGATCCACCTCAACCTCTTCCTCCAACTCAAAAAACCTTGGATCAGTGGAAACAACAATACTTCCACATAGTGTCAATTTATCGAGCGAAAACGAGAAATTAAAACAAGACAACGAAACACTAAATTCTGAATTGGCACGTGCGAAGAAACAATGTGAAGAGTTGGTGGCTTTTTTAAAAGACAATTTAAATGTGGGACCCGATCAAATCAATCGCATTATGAAGCAACAAGGAAGTTGTGAATCTGTTCAAAATGCGGTTGGTGAAAATGAAGAAAGTGGAAGAGATTGTTTGAAATTGTTTGGTGTTTGGTTGAAAGAAGAAAATTACACAAACGAAAGAAACAATAAGAAGAGAGGTTGTGAAGACCAATTGGGTTTTGGTGGGCCTCGAGCTAAAGTGGGTAACAATGTTGTTGACTTTAGTTCTGTTAATGTTGTGAACATGATGAAAAGTGGCAAGGTTTGTAACTGA 864 0.4074 MSQRSAPAPFLLKTYQMVDDFATDDVISWSESGESFVVWKHADFARDLLPKYFKHNNFSSFVRQLNTYGFRKLVPDKWEFANEHFKRGQKHLLTNIKRRKTIPQPSSQPLEAEKTNTNDNSPSNSGNDGVGSTSTSSSNSKNLGSVETTILPHSVNLSSENEKLKQDNETLNSELARAKKQCEELVAFLKDNLNVGPDQINRIMKQQGSCESVQNAVGENEESGRDCLKLFGVWLKEENYTNERNNKKRGCEDQLGFGGPRAKVGNNVVDFSSVNVVNMMKSGKVCN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1285 287 Gene3D - 2 101 IPR036388 -
Mal6g1285 287 SUPERFAMILY "Winged helix" DNA-binding domain 6 99 IPR036390 -
Mal6g1285 287 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g1285 287 MobiDBLite consensus disorder prediction 99 144 - -
Mal6g1285 287 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g1285 287 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g1285 287 MobiDBLite consensus disorder prediction 92 144 - -
Mal6g1285 287 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-1 2 287 - -
Mal6g1285 287 Coils Coil 154 192 - -
Mal6g1285 287 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 287 IPR027725 -
Mal6g1285 287 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g1285 287 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g1285 287 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1285 Mal-Chr6 22908749 22910564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1285 2 287 HSF AT4G36990 48.000 7.11e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal6g1285 HSF_DNA-bind 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1285 K09419 - gmx:100791543 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1285 6 22908749 22910564 Mal5g3599 5 102294607 102297987 PCT