Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1270 ATGCTTTTGTTATCTGTCACTACAGTGCTTAATGATGCTGAGGAAAAGCAGTTTATTGATCCATTGGTGAAGGAATGGGTTGATAGGCTTAAGAATGCTGCCTATGATGCTGATGATGTCTTGGATGAGATTGCCACCAAAGCAGTACAAGATAAGATGGATCCTAGGCTCAACACAACCATACATCAGGTAAAAGATTATGCTTCTTCTCTCAATCCTTTTACTGAACGAGTTCAATCTAAAATTGGTAGGATAGTTGAGAGGTTGAAATCCATATTAGAGCATAAAAATCTTCTTGGTCTTAAGGAAGGAGGTGTAGGTAAACCAATATCATTAGGCTCGGCCACAACTTCTTTGGTTGATGAACAATGCGTGTATGGTAGACATGGTGATAAGGAGAAGATAATAGACTTTTTGTTGGCTGGTGGAGACTCGAATGGAGAGGGGGTGCCGGTAGTTGCGATTGTTGGAATGGGAGGGGTAGGAAAGACTACTCTTGCTCAAATTTTGTACAATGATGAACGTGTGAGGAACCATTTTCAATCTAGATCATGGGCTTCTGTTTCGGAGACTTCAAATGTGAATGAAATAACCAGAAAAGTTTTTGAGTCTTTCACTTTGTCGTATTCTAATATCTCGGACTTGAATATACTCCAAATCAAACTTAAGGATAGATTGACAGGACAAAGGTTTCTACTTGTTCTGGATGGGTTTTGGAATGAGAACTTTCTTGACTGGGATATCCTCCAAAGACCCTTGCTATCAGGAAACTATGGTAGTAGAATCATTGTCACCACGCGTAGTCAAAGTGTTGCAACATTGATCCGTGCTGATTTAAATCACTCCCTCTCGCTTTTATCTCATGAAGATACATGGAAGTTATTCTCTAGTCATGCATTCAAATCAGGGAACCCGAATGAGCATCCCATCTTGGCTCAAATTGGCCAAAAAATAGTAAAAAAGTGCAATGGTCTCCCTCTAGCTGCAAAAGCACTAGGGAGTCTCCTACGTACGAAAGATGTAGGGGAGTGGGAAGGTATATGTGATAGTAGGATATGGGAGTTACCAACCGATAAGTGTAGCATTCTTCCTGCTTTAAGATTGAGCTACAGTCATCTACCTTCTCATTTAAAGCGTTGTTTTACTTATTGTTCCATATTTCCTAAAGGATATGAAATAAAAAAGTGGAACTTGATCTATTTATGGATGGCAGAAGGTATCCTACCACAACAGAGAACAGATAAGAGAATGGAAGATGTAGGAGAAGAATGCTTTGAAGAGTTACTATCTAGATCGTTCTTTTATCAATCGACCTACCATGTATTGCATTATATGATGCATGACCTTATCCATGATGTAGCACAATTTGTTGCAGGCGAATTCTGTTACAACTTAGATGATAACAATCCAAGAAAAATCACGACAAGTGTTCGCCATTTATCTTATTTACAAGATTCAATTGGAATTTTGATGCATATGCGGTATTTGGATCTTTCCTACACGGGAATTGAGTATTTGCCTGATTCTGTTAGCACTTTGTATAACTTGGAGACATTGTTGTTATCAGGTTGTCGTTGTCTCACTATTTTACCTGAAAACATGTCCAACCTTATCAACTTGCGCAAACTTGATATTAGTGGAAGCACCGTTACATCAATGCCTCCAAAATTTGGTAAATTGAAGTCTCTTCAAGTGTTGACCAATTTTGTCGTAGGCAATGCAAGGGGGTCGAAAATTAGTGAGCTAGGGAAGCTTTCGAAACTCCATGGAGCACTTTCGATTGGGAGCCTACAAAATGTCGTTGATGCAATAGAAGCTTCTCATGCCCAGTTGAAGAGTAAGAAATATCTTCATGAACTAGAATTCAAGTGGACTACTACAACTCATGATGAAGAGAGTGAAACCAATGTACTTGACATGCTAGAGCCACATGAAAATGTGAAAAGACTTCTAATCCAAAATTTTGGTGGCAAAAAATTGCCAAATTGGTTAGGGAACTCACCATTTTCTAGCATGGTGTTTCTACATCTTACTAGTTGTGAAAATTGCAAGTCACTACCATCACTTGGACAATTGTCATGCCTCACAGAACTTTGTATTTCAAAGATGAAAAGTCTACAGAAGGTTGGTCTAGAATTCTATGGGAATGTAATGGAGCCATTCAAATCATTGAAAATTTTGAAGTTTGAGGACATGCCAATTTGGGAAGAATGGTCAACCCATAGATTTGAAGAAAATGGGGTGTTCCCTTCACTCCTAGAGCTTTACATTGAGAGATGTCCAAAATTAATCAAAGAGTTACCTGATCACCTTCCTTCCTTAGATAAATTAGTGATCACTGGATGCCAAGCTCTCACAAATCCAATGCCATGGGTTCCAAGATTGAGAGAATTAGTTTTGACCGGTTGTGATGCATTAGTGTCATTATCTGAGAAAATGATGCAGGGAAATAAATGTCTTCAAATCATTGCCATAAACAATTGCTCATCTCTTGTAACAATCTCTATGCATGGTCTACCAAGTACGCTAAGATCACTTGAAATCTATGAGTGCAAAAATTTACAACTATTTCATCCCCAGAGTTTGATGCAGGAATCTCACTACTATTCTTCCCTTGAAAAACTACACTTAAGATCTTGTTGTGATTCTCTGCTATCATTTCCGTTACCCCTCTTCCACAAACTTGAAGATTTACATGTGCAAAATTGTAGCAATCTCAAATTTATTTCATGTGCTCCAAACAGTCTCCCTTATTTTCGAAAGTTAAAATTGAAACAATGCTCCAAACTGTCTCAGTTTCCTGAAGGAGGGTTGCATGCTCCAAAACTTGAGTCACTTTCTATCGTCAAATGTGTTGATTTCTCACCTGAGGCTGAGAGTCCATGGTGTCTTCAAACAATGACATCACTAACTTCTCTTCATATCAGTGGGCTTCCTAGTCTCACTTCACTAGAGCATACAGGAGTTCAATACCTAACATCTCTCAAAAGTCTGAAGATTAAAGCTTGTGCTAACCTTGGATCTCTTCCTTTAGGCTCACTAGTTAACTCCCTTTCTTATCTTACTATCAGAGCATGCCCATTGTTAAAAGTGCTTTGTGAAGAGGACACGGGGGAATACTGGAGTATGGTCTCTCTTATACCCTTCAGAATCATTGAAGACTAG 3165 0.3877 MLLLSVTTVLNDAEEKQFIDPLVKEWVDRLKNAAYDADDVLDEIATKAVQDKMDPRLNTTIHQVKDYASSLNPFTERVQSKIGRIVERLKSILEHKNLLGLKEGGVGKPISLGSATTSLVDEQCVYGRHGDKEKIIDFLLAGGDSNGEGVPVVAIVGMGGVGKTTLAQILYNDERVRNHFQSRSWASVSETSNVNEITRKVFESFTLSYSNISDLNILQIKLKDRLTGQRFLLVLDGFWNENFLDWDILQRPLLSGNYGSRIIVTTRSQSVATLIRADLNHSLSLLSHEDTWKLFSSHAFKSGNPNEHPILAQIGQKIVKKCNGLPLAAKALGSLLRTKDVGEWEGICDSRIWELPTDKCSILPALRLSYSHLPSHLKRCFTYCSIFPKGYEIKKWNLIYLWMAEGILPQQRTDKRMEDVGEECFEELLSRSFFYQSTYHVLHYMMHDLIHDVAQFVAGEFCYNLDDNNPRKITTSVRHLSYLQDSIGILMHMRYLDLSYTGIEYLPDSVSTLYNLETLLLSGCRCLTILPENMSNLINLRKLDISGSTVTSMPPKFGKLKSLQVLTNFVVGNARGSKISELGKLSKLHGALSIGSLQNVVDAIEASHAQLKSKKYLHELEFKWTTTTHDEESETNVLDMLEPHENVKRLLIQNFGGKKLPNWLGNSPFSSMVFLHLTSCENCKSLPSLGQLSCLTELCISKMKSLQKVGLEFYGNVMEPFKSLKILKFEDMPIWEEWSTHRFEENGVFPSLLELYIERCPKLIKELPDHLPSLDKLVITGCQALTNPMPWVPRLRELVLTGCDALVSLSEKMMQGNKCLQIIAINNCSSLVTISMHGLPSTLRSLEIYECKNLQLFHPQSLMQESHYYSSLEKLHLRSCCDSLLSFPLPLFHKLEDLHVQNCSNLKFISCAPNSLPYFRKLKLKQCSKLSQFPEGGLHAPKLESLSIVKCVDFSPEAESPWCLQTMTSLTSLHISGLPSLTSLEHTGVQYLTSLKSLKIKACANLGSLPLGSLVNSLSYLTIRACPLLKVLCEEDTGEYWSMVSLIPFRIIED* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1270 1054 Gene3D Ribonuclease Inhibitor 462 744 IPR032675 -
Mal6g1270 1054 Gene3D - 2 90 - -
Mal6g1270 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 384 IPR027417 -
Mal6g1270 1054 SUPERFAMILY L domain-like 774 1046 - -
Mal6g1270 1054 PANTHER - 6 480 - -
Mal6g1270 1054 PANTHER - 480 837 - -
Mal6g1270 1054 Gene3D - 114 280 IPR027417 -
Mal6g1270 1054 Pfam Rx N-terminal domain 3 56 IPR041118 -
Mal6g1270 1054 Gene3D Ribonuclease Inhibitor 764 863 IPR032675 -
Mal6g1270 1054 Gene3D Ribonuclease Inhibitor 955 1037 IPR032675 -
Mal6g1270 1054 Gene3D Ribonuclease Inhibitor 864 954 IPR032675 -
Mal6g1270 1054 Gene3D - 285 368 IPR042197 -
Mal6g1270 1054 PANTHER DISEASE RESISTANCE PROTEIN RP 6 480 IPR044974 GO:0006952
Mal6g1270 1054 PANTHER DISEASE RESISTANCE PROTEIN RP 480 837 IPR044974 GO:0006952
Mal6g1270 1054 Pfam NB-ARC domain 131 349 IPR002182 GO:0043531
Mal6g1270 1054 Gene3D - 369 456 IPR036388 -
Mal6g1270 1054 PRINTS Disease resistance protein signature 152 167 - -
Mal6g1270 1054 PRINTS Disease resistance protein signature 322 336 - -
Mal6g1270 1054 PRINTS Disease resistance protein signature 511 527 - -
Mal6g1270 1054 PRINTS Disease resistance protein signature 225 239 - -
Mal6g1270 1054 CDD RX-CC_like 3 92 IPR038005 -
Mal6g1270 1054 SUPERFAMILY L domain-like 436 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1270 Mal-Chr6 22552897 22556250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1270 153 455 WRKY Transcription Factor Family AT5G45050 24.606 5.59e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1270 - - aip:107632528 993.801