Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1245 ATGGCTTCCACAGTGACTTCACGTTTTCATGAATCCTTCACCAGAAATGCACTTCGCTCTTATCTCGCTGAATTTATCTCAACTTTCTTCTATGTTCTAATTGTTATTGGCTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTTTGGTTGTTGGTGCTATTGCAAATGCTTTTGCTCTGTCTTCTATTTTGTACATAGCATGGGACATCTCAGGTGGACATGTCAATCCTGCTGTGACCTTTGCAATGGCTGTTGGAGGTCATATTAGTGTCCCAACTGCTCTCTTTTATTGGGTTGCTCAACTTATTGCCTCTGTTATTGCTTGCCTTTTCCTCAAAGTAATTGTTGTTGGAATGCATGTGCCAACATATTCAATTGCAGAAGAGATGACAGGATTTGGAGCATCAATATTAGAGGGTATATTAACATTTGTGTTAGTGTACACAATTTATGCTGCAAGGGACACTAGGCGTGGTCAAGTAAATTCAACAGGAACACTTGTAATTGGTTTAATAGCAGGAGCAAGTGTATTAGCAGCAGGTCCATTCTCTGGTGGTTCAATCAACCCTGCATGTGCTTTTGGCTCTGCTTCCATTGCTGGAACATTCAGGAATCAAGCTGTTTATTGGGTTGGTCCATTGGTTGGTGCTGCTGTTGCTGGCCTTCTTTATGACAATGTGTTGTTCCCTTCTCAGAATTCAGATTCTGTTAGAGGGGTTTCAGATGGAACTGTTAGGGTGTAA 765 0.4183 MASTVTSRFHESFTRNALRSYLAEFISTFFYVLIVIGSGMSSRKLMPDASLNPTSLVVGAIANAFALSSILYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVIACLFLKVIVVGMHVPTYSIAEEMTGFGASILEGILTFVLVYTIYAARDTRRGQVNSTGTLVIGLIAGASVLAAGPFSGGSINPACAFGSASIAGTFRNQAVYWVGPLVGAAVAGLLYDNVLFPSQNSDSVRGVSDGTVRV* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1245 254 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Mal6g1245 254 Pfam Major intrinsic protein 16 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mal6g1245 254 PANTHER AQUAPORIN-8 4 252 IPR034294 -
Mal6g1245 254 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal6g1245 254 SUPERFAMILY Aquaporin-like 9 240 IPR023271 -
Mal6g1245 254 PANTHER AQUAPORIN TIP5-1-RELATED 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1245 Mal-Chr6 21463979 21466019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1245 3 250 Major Intrinsic Protein MIP AT3G47440 62.500 3.71e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1245 K09873 - gmx:100801448 422.55