Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1241 ATGTTTATTTATAGGAAGTTAATTTTGGAGATGGATGACAATGAAGTTGATTTAGCTACACATACAGAAGAGTTCAATGAGCTAGAAAACAAGTCGGAGGAATGGATTCCACAGTGCGATGCTGAACTGAAACCTGTGATTGGTAAGGTCTTTGATACTTTACTAGAAGCGGGTGATTTTTATAAAAACTATGCACATGCTGTTGGTTTTAGTGTGCGTAATTCAACTGAAACAAAAGATACAAATGGTGTCAGATGGAAGTATTTTCTTTGCTCAAAAGAGGGTTTTAAAATGGAAAAAAAGGTAGACGAGCATAAGTTGCTTATTAGTGAAGATAGTTTGCCTAAAGGTAGAAAAAGAAAATTGACCCGGGAGGGATGTAATGCAAGAATTGTTTTCAGGAGAAATGATGAGGGTAAGTTTGAAGTCTCAAAATTTTATGAAGGTCATTCACACACACTTGTCACACCTAGAAAGAAACAGTTGTTAAGATCGGCAAGGAGTGTCAACAGTGTTCATAAGAATTTATTATTTGCTTGCAATAGAGCTAATGTGGGGACTTCAAAAGGTTATCAAATATTGAAGGAGCAGGTTGGGAGTTATGAAGATATAGGATGCACACAAAGAGACTTTCAAAATTTTTCAAGGAATATGAAAGAATTGATCAAAGATTCTGATGCAGATATGTTCATTGATAATTTTAAAAGAAAACATGAGATGAACAATTCTTTTTTCTATGATTATCAATCTGATAATGATGGGAAGTTGAAATATGTGTTTTGGGCCGATGGCATTTCTCGAAAAAAGTACTCTTTGTTTGGAGATGTAGTTTCATTTGATACTACATACAGTACAAATAAGTATCATCAGGTTTTTGCACCATTCACTGGTGTAAATCATCATCGTCAAAGCATAACCTTTGGAGCTGCATTTTTAGCTGATGAAAAAGAAGATTCAATGTGGAGGCTTTTATTGGATCCAATGTACCTAAGAAAATTCAAATTCTTCCACCTGAACCGTCAAATACCAAAGGTTGTGGAAAACGGATTAAAGGGGGGAAAGAGAAGGCAATAG 1074 0.3501 MFIYRKLILEMDDNEVDLATHTEEFNELENKSEEWIPQCDAELKPVIGKVFDTLLEAGDFYKNYAHAVGFSVRNSTETKDTNGVRWKYFLCSKEGFKMEKKVDEHKLLISEDSLPKGRKRKLTREGCNARIVFRRNDEGKFEVSKFYEGHSHTLVTPRKKQLLRSARSVNSVHKNLLFACNRANVGTSKGYQILKEQVGSYEDIGCTQRDFQNFSRNMKELIKDSDADMFIDNFKRKHEMNNSFFYDYQSDNDGKLKYVFWADGISRKKYSLFGDVVSFDTTYSTNKYHQVFAPFTGVNHHRQSITFGAAFLADEKEDSMWRLLLDPMYLRKFKFFHLNRQIPKVVENGLKGGKRRQ* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1241 357 Pfam MULE transposase domain 276 326 IPR018289 -
Mal6g1241 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 37 173 - -
Mal6g1241 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 214 320 - -
Mal6g1241 357 Coils Coil 11 31 - -
Mal6g1241 357 Pfam FAR1 DNA-binding domain 59 155 IPR004330 -
Mal6g1241 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 173 IPR031052 GO:0006355
Mal6g1241 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 214 320 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1241 Mal-Chr6 21336245 21337318 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g1241 FAR1 5.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1241 - - cqi:110709295 325.094