Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1218 ATGTCTCCTCAGCAACCCAGCCGTGTTGATCCAAAAATATGGCAGTGCTGCGTTGGCTCATCCGTGAAAATACCAAAACTGCATTCAAGAGTTTACTACTTTCCACAAGGTTACTTGGAACATGCCTTCCATTCCCCCAACACTGATCAATGCCGTCCATTCTTTCTGTGCGTCGTCTCCGGCGTTGATCTCTTCGCCGATCGTCAAACCGATGAAGTCTTTGCAAAACTTATCCTCACTCCCATCACCAACAGCTGTGTTCACAAACCTCCTGAACCTCAGGTAGTTCGTGAAGCTGATGGTGATAAAGTTGTTTCCTTTAGTAAGACTCTCACCAAGTCTGATGCTAATAACGGTGGTGCATTCTCCGTACCAAGTGAATGTGCGAAGTTGATCTTCCCGCCGCTTGACCTCAAATCCGAATTGCCGTCTCAGGAACTTGAGGTCACTGACATTCACGGCGAAGTTTGGAACTTTCGCCACACCTACCGTGGGAACCCCAAGCGACACCTGATCACCATTAACTGGAGTAAGTTCGTTGATACGAAGAAACTCATTGCTGGCGATTCCCTAGTTTTAATGAAAAATTCTGACGGAAAGATCTATGTCGGTATCCGCAGGCACAAGTCAGGTGTTGCTGCCAAGATAACGGAAAAATCCGTTATGGAGGCAGGAAAATTGGCGGATAAGATGGCTTTTGAAGTTGTGTATTATCCGACGGCAGAAGGTTGGTGTGATTTTGTTGTTGATGCTACGGTTGTCGAGGATGCAATGAATATCAAATGGAATATTGGAATGAGAGTTAAACTTTGTTTGAAGACTGATGAATCTTCAAAAAGATGCTCAGTTATTGAAGGGACAATATCTGCTCTATCTGCTCCTTCTCATCATCCATGGCGCATGCTTCAGGTCAACTGGGATAAACCTGGAGTCTCACAAAATCCAAGCCGAGTAAGTCCTTGGCAGGTTGAACTTATTTCCTTCATCCCAACACTGCCTCTACAGTTCCCCTCAACTAAAAAGTTTAAAACTGCTCAGGATTCTTCCTTATCAGCTGTAGAGGGACCCTGCAATATTCCAGTGATAGAGTTCGATTTTTTACCAACGCCATCGTTCAACCGAACATCGTCGAATTGTGATGGTTGTGTTGATGGCATGCAGGGAGCCAGGCCTAATCTTTTTTCAGCGTCAACGTCTTCGAACTTTTTGAATGATACAAGGATAGACAATGTGCCAGCTAAGCTAAACATTATTAGCCCTCCTATTTTGAACTCGTTTGAGAAAAATATTGACGGTACCCACAAATGCAACACCGAAAAAGTTACTTCATTTAAACTATTTGGTTATACCATAAACGTTGTAGAAACTGATTTGGACGGTTCTAGCATCAATGGAGAGGATGGTTGCAAGAGATGCAAAGAGGATGGTTGCAAGGGATGCAAATTGGATGGTTCCAAATAA 1461 0.4387 MSPQQPSRVDPKIWQCCVGSSVKIPKLHSRVYYFPQGYLEHAFHSPNTDQCRPFFLCVVSGVDLFADRQTDEVFAKLILTPITNSCVHKPPEPQVVREADGDKVVSFSKTLTKSDANNGGAFSVPSECAKLIFPPLDLKSELPSQELEVTDIHGEVWNFRHTYRGNPKRHLITINWSKFVDTKKLIAGDSLVLMKNSDGKIYVGIRRHKSGVAAKITEKSVMEAGKLADKMAFEVVYYPTAEGWCDFVVDATVVEDAMNIKWNIGMRVKLCLKTDESSKRCSVIEGTISALSAPSHHPWRMLQVNWDKPGVSQNPSRVSPWQVELISFIPTLPLQFPSTKKFKTAQDSSLSAVEGPCNIPVIEFDFLPTPSFNRTSSNCDGCVDGMQGARPNLFSASTSSNFLNDTRIDNVPAKLNIISPPILNSFEKNIDGTHKCNTEKVTSFKLFGYTINVVETDLDGSSINGEDGCKRCKEDGCKGCKLDGSK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1218 486 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 209 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal6g1218 486 SUPERFAMILY DNA-binding pseudobarrel domain 102 208 IPR015300 -
Mal6g1218 486 ProSiteProfiles B3 DNA-binding domain profile. 107 209 IPR003340 GO:0003677
Mal6g1218 486 SMART B3_2 107 209 IPR003340 GO:0003677
Mal6g1218 486 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 215 406 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal6g1218 486 Pfam Auxin response factor 227 302 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal6g1218 486 Gene3D - 261 330 - -
Mal6g1218 486 CDD B3_DNA 106 207 IPR003340 GO:0003677
Mal6g1218 486 Gene3D - 104 209 IPR015300 -
Mal6g1218 486 PANTHER AUXIN RESPONSE FACTOR 5 209 - -
Mal6g1218 486 PANTHER AUXIN RESPONSE FACTOR 215 406 - -
Mal6g1218 486 Pfam B3 DNA binding domain 107 208 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1218 Mal-Chr6 20671692 20675007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1218 8 478 B3 DNA Binding Superfamily AT1G77850 36.545 9.58e-100 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal6g1218 B3 3.4e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1218 - - mtr:MTR_5g082140 575.089