Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1202 ATGGCTGCCGCTGACAACAACAACAACCACAACAACCCCAAGGATTATTACAAAGTGCTGGAGATTGAATATGATGCAACAGATGAAGATATCAGATTAAATTACCGAAGACTTGCCCTGAAATGGCATCCTGACAAACACAAAGATGATAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTGAGCGATCCTGCCAAGCGTTTAGACTATGATTTAACTGGGGCATGTGAGATTGAGAAGTACAGCTTGCAGGAATATCTGGCCAGATTTAAAGGAATGATTCTGACCTGCAATGGACTTGGTATCAACAATGAAGACAGATGGTCACAACAATTGATTGAAGGTTTTGAACCACTAGATAAATAA 384 0.3906 MAAADNNNNHNNPKDYYKVLEIEYDATDEDIRLNYRRLALKWHPDKHKDDSAVTAKFQEINEAYNVLSDPAKRLDYDLTGACEIEKYSLQEYLARFKGMILTCNGLGINNEDRWSQQLIEGFEPLDK* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1202 127 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 119 - -
Mal6g1202 127 Pfam DnaJ domain 15 77 IPR001623 -
Mal6g1202 127 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Mal6g1202 127 CDD DnaJ 15 69 IPR001623 -
Mal6g1202 127 PRINTS DnaJ domain signature 35 50 IPR001623 -
Mal6g1202 127 PRINTS DnaJ domain signature 17 35 IPR001623 -
Mal6g1202 127 PRINTS DnaJ domain signature 52 72 IPR001623 -
Mal6g1202 127 PRINTS DnaJ domain signature 72 91 IPR001623 -
Mal6g1202 127 SUPERFAMILY Chaperone J-domain 11 99 IPR036869 -
Mal6g1202 127 Gene3D DnaJ domain 1 94 IPR036869 -
Mal6g1202 127 ProSiteProfiles dnaJ domain profile. 15 80 IPR001623 -
Mal6g1202 127 PANTHER DNAJ PROTEIN-LIKE 7 119 - -
Mal6g1202 127 SMART dnaj_3 14 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1202 Mal-Chr6 20397457 20401724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1202 16 77 C2H2 Transcription Factor Family AT1G74250 46.269 1.08e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1202 - - gmx:100527491 220.32